DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2070 and Rdh13

DIOPT Version :9

Sequence 1:NP_001260786.1 Gene:CG2070 / 35706 FlyBaseID:FBgn0033203 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001101938.1 Gene:Rdh13 / 361504 RGDID:1304959 Length:334 Species:Rattus norvegicus


Alignment Length:305 Identity:157/305 - (51%)
Similarity:203/305 - (66%) Gaps:1/305 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GIYLLRQYMQGGQFTTKTNETGRVAIVTGCNQGIGKETVLELARRGATVYMACRDMKKCENARRE 86
            |..||:.|:.||...:|....||..||||.|.||||:|.||||:||..:.:||||.:|||.|.::
  Rat    17 GTVLLKDYVAGGACPSKATIPGRTVIVTGANTGIGKQTALELAKRGGNIILACRDREKCEAAAKD 81

  Fly    87 IIKATNNQNIFARQLDLCSMKSIRNFAAGFKREQNKLHILINNAGIMDCPKMLTEDGFEMQIGVN 151
            |...|.|..:.|..|||.|:||||.||....:|:.::.||:|||.:|.||...||||||||.|||
  Rat    82 IRGETLNPRVRAEHLDLASLKSIREFAGKIIKEEERVDILVNNAAVMRCPHWTTEDGFEMQFGVN 146

  Fly   152 HMGHFLLTLLLLDVLKSSAPSRVVVLSSIAHRFGRIKRDDLNSE-KSYDRKMAYCQSKLANVLFT 215
            |:||||||.||||.||:|||||::.|||:||..|.|..:|||.: |.||.|.||||||||.||||
  Rat   147 HLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQIKKYDTKAAYCQSKLAVVLFT 211

  Fly   216 RELAKRLSGTGVTVNALHPGVVNTELFRNTPFLGSWFGKLLIAPIIWIFIKTARNGAQTTLYAAL 280
            :||::||.|||||||||||||..|||.|:|....|.|...::.|..|:..|:.:..||.:.|.|:
  Rat   212 KELSRRLQGTGVTVNALHPGVARTELGRHTGMHNSAFSGFMLGPFFWLLFKSPQLAAQPSTYLAV 276

  Fly   281 DPSLEKVSGRYFSDCKQKHVGSAAQYDDDAQFLWAESEKWTGINI 325
            ...||.|||:||...::|.....|:.::.|:.||.||....|:::
  Rat   277 AEELESVSGKYFDGLREKAPSPEAEDEEVARRLWTESAHLVGLDM 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2070NP_001260786.1 PRK06197 41..323 CDD:235737 149/282 (53%)
NADB_Rossmann 43..317 CDD:304358 147/274 (54%)
Rdh13NP_001101938.1 NADB_Rossmann 38..313 CDD:419666 147/274 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 247 1.000 Domainoid score I2082
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 312 1.000 Inparanoid score I2503
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm45462
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.780

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