DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2070 and Rdh12

DIOPT Version :9

Sequence 1:NP_001260786.1 Gene:CG2070 / 35706 FlyBaseID:FBgn0033203 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001101507.1 Gene:Rdh12 / 314264 RGDID:1310462 Length:316 Species:Rattus norvegicus


Alignment Length:305 Identity:160/305 - (52%)
Similarity:198/305 - (64%) Gaps:10/305 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IYL----LRQYMQGGQFTTKTNETGRVAIVTGCNQGIGKETVLELARRGATVYMACRDMKKCENA 83
            :||    :|::..||..|||....|:|.::||.|.||||||..|||||||.||:||||:.|.|:|
  Rat    15 LYLATPSIRKFFAGGVCTTKVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESA 79

  Fly    84 RREIIKATNNQNIFARQLDLCSMKSIRNFAAGFKREQNKLHILINNAGIMDCPKMLTEDGFEMQI 148
            ..||...|.|..:..|:|||...||||.||.||..|:.||||||||||:|.||...|.||||...
  Rat    80 ASEIRADTKNSQVLVRKLDLSDTKSIRTFAEGFLAEEKKLHILINNAGVMMCPYSKTVDGFETHF 144

  Fly   149 GVNHMGHFLLTLLLLDVLKSSAPSRVVVLSSIAHRFGRIKRDDLNSEKSYDRKMAYCQSKLANVL 213
            ||||:||||||.|||..||.|||:||:.|||:||..|:|:..||.|:|.|....||..|||||||
  Rat   145 GVNHLGHFLLTYLLLGRLKESAPARVINLSSVAHLGGKIRFHDLQSKKRYCSGFAYSHSKLANVL 209

  Fly   214 FTRELAKRLSGTGVTVNALHPGVVNTELFRNTPFLGSWFGKLLIAPIIWIFIKTARNGAQTTLYA 278
            |||||||||.|||||...:|||.|.:|:.|::      |...|:..:...|.|:...||||:|:.
  Rat   210 FTRELAKRLQGTGVTAYVVHPGCVLSEITRHS------FLMCLLWRLFSPFFKSPWQGAQTSLHC 268

  Fly   279 ALDPSLEKVSGRYFSDCKQKHVGSAAQYDDDAQFLWAESEKWTGI 323
            ||:..||.:||:||||||:..|...|:....|:.||..|.:..||
  Rat   269 ALEEGLEPLSGKYFSDCKRTWVSPRARNKKTAERLWNVSCELLGI 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2070NP_001260786.1 PRK06197 41..323 CDD:235737 150/281 (53%)
NADB_Rossmann 43..317 CDD:304358 149/273 (55%)
Rdh12NP_001101507.1 NADB_Rossmann 39..307 CDD:419666 149/273 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm45462
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.930

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