DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2070 and Rdh13

DIOPT Version :9

Sequence 1:NP_001260786.1 Gene:CG2070 / 35706 FlyBaseID:FBgn0033203 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_780581.1 Gene:Rdh13 / 108841 MGIID:1918732 Length:334 Species:Mus musculus


Alignment Length:303 Identity:156/303 - (51%)
Similarity:203/303 - (66%) Gaps:1/303 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GIYLLRQYMQGGQFTTKTNETGRVAIVTGCNQGIGKETVLELARRGATVYMACRDMKKCENARRE 86
            |..||:.|:.||...:|....|:..||||.|.||||:|.||||:||..|.:|||||:|||.|.::
Mouse    17 GTVLLKDYVAGGACPSKATIPGKTVIVTGANTGIGKQTALELAKRGGNVILACRDMEKCEVAAKD 81

  Fly    87 IIKATNNQNIFARQLDLCSMKSIRNFAAGFKREQNKLHILINNAGIMDCPKMLTEDGFEMQIGVN 151
            |...|.|..:.|.:|||.|:||||.||....:|:.::.||:|||.:|.||...||||||||.|||
Mouse    82 IRGETLNPRVRAERLDLASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTEDGFEMQFGVN 146

  Fly   152 HMGHFLLTLLLLDVLKSSAPSRVVVLSSIAHRFGRIKRDDLNSE-KSYDRKMAYCQSKLANVLFT 215
            ::||||||.||||.||:|||||::.|||:||..|.|..:|||.: |.||.|.||||||||.||||
Mouse   147 YLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQMKKYDTKAAYCQSKLAVVLFT 211

  Fly   216 RELAKRLSGTGVTVNALHPGVVNTELFRNTPFLGSWFGKLLIAPIIWIFIKTARNGAQTTLYAAL 280
            :||:.||.|:|||||||||||..|||.|:|....|.|...::.|..|:..|:.:..||.:.|.|:
Mouse   212 KELSHRLQGSGVTVNALHPGVARTELGRHTGMHNSAFSGFMLGPFFWLLFKSPQLAAQPSTYLAV 276

  Fly   281 DPSLEKVSGRYFSDCKQKHVGSAAQYDDDAQFLWAESEKWTGI 323
            ...||.|||:||...::|.....|:.::.|:.||.||.:..|:
Mouse   277 AEELENVSGKYFDGLREKAPSPEAEDEEVARRLWTESARLVGL 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2070NP_001260786.1 PRK06197 41..323 CDD:235737 148/282 (52%)
NADB_Rossmann 43..317 CDD:304358 146/274 (53%)
Rdh13NP_780581.1 NADB_Rossmann 38..313 CDD:419666 146/274 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 312 1.000 Inparanoid score I2561
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm43392
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.800

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