DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2070 and LOC100497142

DIOPT Version :9

Sequence 1:NP_001260786.1 Gene:CG2070 / 35706 FlyBaseID:FBgn0033203 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_002932135.3 Gene:LOC100497142 / 100497142 -ID:- Length:352 Species:Xenopus tropicalis


Alignment Length:292 Identity:111/292 - (38%)
Similarity:173/292 - (59%) Gaps:27/292 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GRVAIVTGCNQGIGKETVLELARRGATVYMACRDMKKCENARREIIKATNNQNIFARQLDLCSMK 107
            |:..::||...||||||.:.||:|||.|.:...|.:|.:.|.|:|.:.:.:.|:...:|::.:::
 Frog    66 GKTVLITGGTSGIGKETAIALAKRGARVIITNEDEEKGDTALRQIKRESVSMNVKIMKLNMANLQ 130

  Fly   108 SIRNFAAGFKREQNKLHILINNAGIMDCPKML--TEDGFEMQIGVNHMGHFLLTLLLLDVLKSSA 170
            |||.|...|.:::.:|.|||||||:   |.:|  |::||.|..||||:|.||||.||.:.|||.:
 Frog   131 SIREFCKDFVQKEKRLDILINNAGV---PAVLDWTDNGFSMCFGVNHLGTFLLTSLLTERLKSCS 192

  Fly   171 PSRVVVLSSIAHRFGRIKRDDLNSEKSYD--RKMAYCQSKLANVLFTRELAKRLSGTGVTVNALH 233
            ||||:.::|..|::.|:...|||    |:  ...:||:||||||.||:|||:::...|||..|:|
 Frog   193 PSRVITVTSEVHKYQRLDFADLN----YNIVPLFSYCRSKLANVYFTQELARQIERHGVTSCAVH 253

  Fly   234 PGVVNTELFRNTPFLGSWFGK--LLIAPIIWI----FIKTARNGAQTTLYAALDPSLEKVSGRYF 292
            ||.|          :|.|..|  :|...::::    |..:...|||:.::.|:...:.:.:|.||
 Frog   254 PGYV----------VGDWTSKFSVLFRIVMYVISSMFFISCLEGAQSVIHCAVSDDILQHNGGYF 308

  Fly   293 SDCKQKHVGSAAQYDDDAQFLWAESEKWTGIN 324
            ||||...:...||....|:.||..||...|::
 Frog   309 SDCKPCKLRPHAQDTGIAKKLWEVSEIMVGLS 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2070NP_001260786.1 PRK06197 41..323 CDD:235737 110/289 (38%)
NADB_Rossmann 43..317 CDD:304358 108/283 (38%)
LOC100497142XP_002932135.3 AraJ 11..>59 CDD:225371
NADB_Rossmann 66..333 CDD:419666 108/283 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

Return to query results.
Submit another query.