DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30491 and AT4G11410

DIOPT Version :9

Sequence 1:NP_001260784.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_192880.1 Gene:AT4G11410 / 826745 AraportID:AT4G11410 Length:317 Species:Arabidopsis thaliana


Alignment Length:300 Identity:117/300 - (39%)
Similarity:169/300 - (56%) Gaps:19/300 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 QFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVYMACRNLKKCEEAREEIVLETKNKYVYC 100
            :.|...:.||...|||||::|||:||.|.:|.||..|.||.||.....:.|::|:.|.....:..
plant    20 EVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAVRNTDSGNQVRDKILKEIPQAKIDV 84

  Fly   101 RQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSDGIELQLGVNHMGHFLLTNLLL 165
            .:.||:|..|:|.|.:.::.....|::||||||:|.||..|:||.||||...||:||||||||||
plant    85 MKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMACPFLLSSDNIELQFATNHLGHFLLTNLLL 149

  Fly   166 DLLKKSS-----PSRIVNVSSLAHT---RGEINTGDLNSDKSYDEGKAYSQSKLANVLFTRELAK 222
            :.:||::     ..|||.|||..|.   |..:....:|.:..|:..:||.||||.|:|...|||:
plant   150 ERMKKTASESNREGRIVIVSSEGHRFAYREGVQFDKINDEARYNTLQAYGQSKLGNILHATELAR 214

  Fly   223 --RLEGTNVTANALHPGVVDTEIIRHMGFFNNF--FAGLFVKPLFWPFVKTPRNGAQTSLYVALD 283
              :.:|.|:|||:||||.:.|.::|:..|.|..  ..|.:|       :|:...||.|:.|.||.
plant   215 LFKEQGVNITANSLHPGSIMTNLLRYHSFINTIGNAVGKYV-------LKSIPQGAATTCYAALH 272

  Fly   284 PELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVSEKWT 323
            |:.:.|:|:|..|..:.:......|...||.||..|.:.|
plant   273 PQAKGVSGEYLMDNNISDPNSQGKDKDLAKKLWEFSLRLT 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_001260784.1 PRK06197 43..323 CDD:235737 115/291 (40%)
NADB_Rossmann 45..319 CDD:304358 113/285 (40%)
AT4G11410NP_192880.1 retinol-DH_like_SDR_c_like 29..305 CDD:212492 111/282 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 219 1.000 Inparanoid score I1212
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D921996at2759
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - mtm1091
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.780

Return to query results.
Submit another query.