DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and rdh20

DIOPT Version :10

Sequence 1:NP_610306.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_683600.5 Gene:rdh20 / 555864 ZFINID:ZDB-GENE-131127-122 Length:316 Species:Danio rerio


Alignment Length:219 Identity:57/219 - (26%)
Similarity:84/219 - (38%) Gaps:52/219 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GKVFIVTGANTGIGKETVREIAKRGGTVYM------ACRNLKKCEEAR-----EEIVLETKNKYV 98
            |::.::||:...:|:....|..|.|..|.:      |..:..|...||     ...|..||.:.|
Zfish    36 GELVLITGSGGALGRLFALEFTKHGAEVVLWDVNGEANEDTAKLVRARGGQAHAYTVDVTKREEV 100

  Fly    99 YCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGV------MRCPRSLTSDGIELQLGVNHMGH 157
            | |..||..:|..|           .:..|:|||||      :.||..|    :|..|.||....
Zfish   101 Y-RTADLVREEVGR-----------DVTYLVNNAGVVAGERLLDCPDYL----LERTLKVNCHAL 149

  Fly   158 FLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLNSDKSYDEGKAYSQSKLANVLFTRELA- 221
            |......|..:|..:...|:.::|:.   |..:|..:..         |..||.|.|.|...|| 
Zfish   150 FWTVKAFLPQMKDKNHGHIITIASVL---GLFSTACVED---------YCASKFAAVGFHESLAH 202

  Fly   222 ----KRLEGTNVTANALHPGVVDT 241
                :.|:|...|  .:.|.:|||
Zfish   203 ELLTEDLDGVKTT--LVCPYIVDT 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_610306.1 Rossmann-fold NAD(P)(+)-binding proteins 45..319 CDD:473865 57/219 (26%)
rdh20XP_683600.5 17beta-HSDXI-like_SDR_c 38..282 CDD:187598 56/217 (26%)

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