DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and rdh14

DIOPT Version :9

Sequence 1:NP_001260784.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001017231.1 Gene:rdh14 / 549985 XenbaseID:XB-GENE-1018384 Length:323 Species:Xenopus tropicalis


Alignment Length:308 Identity:151/308 - (49%)
Similarity:192/308 - (62%) Gaps:20/308 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GLAFFVKDLMQ-----GGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVYMACRNLKKC 82
            ||...|:.|:.     ||.....    ||..|:||||.||||.|..|:.|:...|.:|||:..:.
 Frog    19 GLILVVRRLLSNSVRAGGSGLMR----GKTVIITGANCGIGKATAAELVKQEARVILACRDQGRA 79

  Fly    83 EEAREEIVLETKNK-YVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSDGI 146
            |||..|:..|...: .:..:|.||.|.:|:|.|.....:|:..|.||||||||.:||.:.|.||.
 Frog    80 EEAAAELRREAGERGEIVIKQLDLGSLQSVRRFCQEVLKEEPRLDVLINNAGVFQCPYTKTEDGF 144

  Fly   147 ELQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLNSDKSYDEGKAYSQSKL 211
            |:|.||||:||||||:.||.|||.|:|||||.|||..:..||||..||||:|||.....||:|||
 Frog   145 EMQFGVNHLGHFLLTHHLLGLLKSSAPSRIVVVSSKLYKYGEINFDDLNSEKSYSRSFGYSRSKL 209

  Fly   212 ANVLFTRELAKRLEGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKPLF----WPFVKTPRN 272
            ||:|||||||.|||||.||.||||||:|.|.:.||:..      .:.:||||    |.|.|:|..
 Frog   210 ANILFTRELASRLEGTGVTVNALHPGIVRTNLGRHINI------PILIKPLFNVVSWAFFKSPEE 268

  Fly   273 GAQTSLYVALDPELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVSE 320
            |||||:|:|..||:|.|:|.||.:.|.:|:.|.|.|...|:.||.:||
 Frog   269 GAQTSIYLASSPEVEGVSGSYFGNSKEEELLPKAMDDLVARKLWDISE 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_001260784.1 PRK06197 43..323 CDD:235737 145/283 (51%)
NADB_Rossmann 45..319 CDD:304358 143/278 (51%)
rdh14NP_001017231.1 NADB_Rossmann 42..315 CDD:389744 143/278 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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