DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and Sdr16c6

DIOPT Version :10

Sequence 1:NP_610306.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001102826.1 Gene:Sdr16c6 / 502939 RGDID:1562060 Length:316 Species:Rattus norvegicus


Alignment Length:251 Identity:60/251 - (23%)
Similarity:107/251 - (42%) Gaps:29/251 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LAFFVKDLMQGGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVYMACRNLKKCEEAREE 88
            |.:|::.|:......:..:.:|::.::|||.:|:|:......|..|.|:.:...|    :|...|
  Rat    15 LYYFLESLVFKVIPKRRKDVSGEIVLITGAGSGLGRLLAMHFANHGATLVLWDIN----QEGNME 75

  Fly    89 IVLETKNK---YVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCPRSL-TSDG-IEL 148
            .....|.|   .|:..:||.:::..:.......:.|...:.:||||||::.....| |.|. :|.
  Rat    76 TYKLVKQKGDVKVFAYKCDCSNRTEVYRVADQVREEVGDVTILINNAGIVTGKSFLDTPDHLVEK 140

  Fly   149 QLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLNSDKSYDEGKAYSQSKLAN 213
            ...||.:.||.:....|..:..::...:|.:||:|...|.....|.:|.|       ::...||.
  Rat   141 SFLVNAISHFWICKTFLPAMINANHGHLVCISSIAGVVGINGLSDYSSSK-------FAAFGLAE 198

  Fly   214 VLFTRELAKRLEGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVK-PLFWPFVK 268
            .||. ||. .:..||:.:..:.|..:.|          ..|.|...| ||..|.::
  Rat   199 SLFL-ELT-MVRKTNIKSTIVCPYFIKT----------GMFEGCKTKYPLLLPLLE 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_610306.1 Rossmann-fold NAD(P)(+)-binding proteins 45..319 CDD:473865 57/230 (25%)
Sdr16c6NP_001102826.1 17beta-HSDXI-like_SDR_c 38..274 CDD:187598 56/228 (25%)

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