DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and rdh13

DIOPT Version :10

Sequence 1:NP_610306.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001011000.1 Gene:rdh13 / 496409 XenbaseID:XB-GENE-965068 Length:329 Species:Xenopus tropicalis


Alignment Length:307 Identity:163/307 - (53%)
Similarity:206/307 - (67%) Gaps:1/307 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SFTGTTTGLAFFVKDLMQGGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVYMACRNLK 80
            |..||..|.|..:||...||....:.:..|:..|||||||||||||..|:|||||.:.||||::.
 Frog     9 SMVGTALGGAILLKDYTGGGNCPSKASIIGQTVIVTGANTGIGKETALELAKRGGRIIMACRDMG 73

  Fly    81 KCEEAREEIVLETKNKYVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSDG 145
            |||.|..:|..:|.|..|:.|..||||.:||:.|......|:|.:.||||||.|||||...|.|.
 Frog    74 KCENAARDIRGKTLNHNVFARHLDLASSKSIKEFAKTIINEEERVDVLINNAAVMRCPHWKTEDN 138

  Fly   146 IELQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLN-SDKSYDEGKAYSQS 209
            .|:|.||||:||||||||||:.:|:|..|||:|||||||..|:|:..||| ..|.|:...||.||
 Frog   139 FEMQFGVNHLGHFLLTNLLLEKMKRSENSRIINVSSLAHIAGDIDFDDLNWEKKKYNTKAAYCQS 203

  Fly   210 KLANVLFTRELAKRLEGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKPLFWPFVKTPRNGA 274
            ||||||||.||||||:||.:|||:|||||.|||:.||.|...:.|:...:.||||..||:|:..|
 Frog   204 KLANVLFTNELAKRLQGTKLTANSLHPGVADTELGRHTGMHQSAFSSTILAPLFWFLVKSPKQAA 268

  Fly   275 QTSLYVALDPELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVSEK 321
            |.|:|:|:...|:.|:|:||:..|.||.||.|.|.::|:.||..|.|
 Frog   269 QPSVYLAVAENLQGVSGKYFNALKEKEPAPQALDEESARKLWEESAK 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_610306.1 Rossmann-fold NAD(P)(+)-binding proteins 45..319 CDD:473865 152/274 (55%)
rdh13NP_001011000.1 retinol-DH_like_SDR_c 38..313 CDD:212495 152/274 (55%)

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