DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30491 and CG8888

DIOPT Version :9

Sequence 1:NP_001260784.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster


Alignment Length:197 Identity:43/197 - (21%)
Similarity:77/197 - (39%) Gaps:35/197 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SRTAFWLSFTGTTTGLAFFVKDLMQGGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVY 73
            |..|.::.|...|.|...|.       .|.| .:.:||..::||....:.....:::...|.|||
  Fly    67 STFAVFVWFALATVGAVLFY-------HFVK-VSASGKGVLITGCEAPLAWYLAKKLDDLGFTVY 123

  Fly    74 MACRN-LKKCEEAREEIVLETKNKYVYCRQCDLASQESIRHFVAAFKREQEHL-HVLINNAGVMR 136
            ..... :::.:||:  |:.|..:..:.....|:.|:::|   :.|.:...:|| |.......|:.
  Fly   124 AGFNTPIEESDEAK--ILKEVTSGRMKLLHLDVTSEKTI---LEAARYVSQHLPHGAEGLWSVVH 183

  Fly   137 CPRSLTSDGIE--------LQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGD 193
            |...:....:|        ..|.:|.:|...||.:.|.|:::            ||.|....|..
  Fly   184 CAHWIALGELEWIPFAVLRKSLDLNLLGSARLTQIFLPLVRR------------AHGRVVFLTSG 236

  Fly   194 LN 195
            ||
  Fly   237 LN 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_001260784.1 PRK06197 43..323 CDD:235737 35/163 (21%)
NADB_Rossmann 45..319 CDD:304358 35/161 (22%)
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 34/160 (21%)
adh_short 96..293 CDD:278532 34/160 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447601
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.