DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30491 and Rdh11

DIOPT Version :9

Sequence 1:NP_001260784.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001012193.1 Gene:Rdh11 / 362757 RGDID:1312001 Length:316 Species:Rattus norvegicus


Alignment Length:311 Identity:151/311 - (48%)
Similarity:206/311 - (66%) Gaps:10/311 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FWLSFTGTTTGLAFFV----KDLMQGGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVY 73
            ||.....:...:.|.|    :.::..|..|.....:|||.|||||||||||||.:::|:||..||
  Rat     2 FWFPLLLSLPFILFLVTPKIRKMLSCGVCTSNVQLSGKVAIVTGANTGIGKETAKDLARRGARVY 66

  Fly    74 MACRNLKKCEEAREEIVLETKNKYVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCP 138
            :|||:::|.|....||...|.|..|..|:.|||..:|||.|...|..|:::||:||||||||.||
  Rat    67 LACRDMQKGELVASEIQATTGNSQVLVRKLDLADTKSIRAFAEGFLAEEKYLHILINNAGVMMCP 131

  Fly   139 RSLTSDGIELQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLNSDKSYDEG 203
            .|.|:||.|:..||||:||||||:|||:.||:|.|||:||||||||..|.|:..:|:.:|.|..|
  Rat   132 YSKTADGFEMHFGVNHLGHFLLTHLLLEKLKESGPSRVVNVSSLAHHLGRIHFHNLHGEKFYSGG 196

  Fly   204 KAYSQSKLANVLFTRELAKRLEGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKPLFWPFVK 268
            .||..|||||:|||:|||:||:|:.||..::|||.|.:|:|||.      .|..::..||:.|:|
  Rat   197 LAYCHSKLANILFTKELARRLKGSRVTTYSVHPGTVHSELIRHS------TALKWLWQLFFFFIK 255

  Fly   269 TPRNGAQTSLYVALDPELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVS 319
            ||:.|||||||.|:...:|.::|.:||||:|..::..|.:...|:.||.||
  Rat   256 TPQQGAQTSLYCAVTEGIEGLSGSHFSDCQLAWVSSQAGNETIARRLWDVS 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_001260784.1 PRK06197 43..323 CDD:235737 145/277 (52%)
NADB_Rossmann 45..319 CDD:304358 143/273 (52%)
Rdh11NP_001012193.1 NADB_Rossmann 38..306 CDD:419666 143/273 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm45462
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - LDO PTHR24320
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.930

Return to query results.
Submit another query.