DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and Rdh11

DIOPT Version :10

Sequence 1:NP_610306.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001012193.1 Gene:Rdh11 / 362757 RGDID:1312001 Length:316 Species:Rattus norvegicus


Alignment Length:311 Identity:151/311 - (48%)
Similarity:206/311 - (66%) Gaps:10/311 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FWLSFTGTTTGLAFFV----KDLMQGGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVY 73
            ||.....:...:.|.|    :.::..|..|.....:|||.|||||||||||||.:::|:||..||
  Rat     2 FWFPLLLSLPFILFLVTPKIRKMLSCGVCTSNVQLSGKVAIVTGANTGIGKETAKDLARRGARVY 66

  Fly    74 MACRNLKKCEEAREEIVLETKNKYVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCP 138
            :|||:::|.|....||...|.|..|..|:.|||..:|||.|...|..|:::||:||||||||.||
  Rat    67 LACRDMQKGELVASEIQATTGNSQVLVRKLDLADTKSIRAFAEGFLAEEKYLHILINNAGVMMCP 131

  Fly   139 RSLTSDGIELQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLNSDKSYDEG 203
            .|.|:||.|:..||||:||||||:|||:.||:|.|||:||||||||..|.|:..:|:.:|.|..|
  Rat   132 YSKTADGFEMHFGVNHLGHFLLTHLLLEKLKESGPSRVVNVSSLAHHLGRIHFHNLHGEKFYSGG 196

  Fly   204 KAYSQSKLANVLFTRELAKRLEGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKPLFWPFVK 268
            .||..|||||:|||:|||:||:|:.||..::|||.|.:|:|||.      .|..::..||:.|:|
  Rat   197 LAYCHSKLANILFTKELARRLKGSRVTTYSVHPGTVHSELIRHS------TALKWLWQLFFFFIK 255

  Fly   269 TPRNGAQTSLYVALDPELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVS 319
            ||:.|||||||.|:...:|.::|.:||||:|..::..|.:...|:.||.||
  Rat   256 TPQQGAQTSLYCAVTEGIEGLSGSHFSDCQLAWVSSQAGNETIARRLWDVS 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_610306.1 Rossmann-fold NAD(P)(+)-binding proteins 45..319 CDD:473865 143/273 (52%)
Rdh11NP_001012193.1 Rossmann-fold NAD(P)(+)-binding proteins 38..306 CDD:473865 143/273 (52%)

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