DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and Rdh13

DIOPT Version :9

Sequence 1:NP_001260784.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001101938.1 Gene:Rdh13 / 361504 RGDID:1304959 Length:334 Species:Rattus norvegicus


Alignment Length:306 Identity:158/306 - (51%)
Similarity:201/306 - (65%) Gaps:1/306 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LSFTGTTTGLAFFVKDLMQGGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVYMACRNL 79
            :|..||..|....:||.:.||....:....|:..|||||||||||:|..|:|||||.:.:|||:.
  Rat     8 VSVVGTVIGGTVLLKDYVAGGACPSKATIPGRTVIVTGANTGIGKQTALELAKRGGNIILACRDR 72

  Fly    80 KKCEEAREEIVLETKNKYVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSD 144
            :|||.|.::|..||.|..|.....||||.:|||.|.....:|:|.:.:|:|||.|||||...|.|
  Rat    73 EKCEAAAKDIRGETLNPRVRAEHLDLASLKSIREFAGKIIKEEERVDILVNNAAVMRCPHWTTED 137

  Fly   145 GIELQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLN-SDKSYDEGKAYSQ 208
            |.|:|.||||:|||||||||||.||.|:||||:|:|||||..|.|:..||| ..|.||...||.|
  Rat   138 GFEMQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQIKKYDTKAAYCQ 202

  Fly   209 SKLANVLFTRELAKRLEGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKPLFWPFVKTPRNG 273
            ||||.||||:||::||:||.||.|||||||..||:.||.|..|:.|:|..:.|.||...|:|:..
  Rat   203 SKLAVVLFTKELSRRLQGTGVTVNALHPGVARTELGRHTGMHNSAFSGFMLGPFFWLLFKSPQLA 267

  Fly   274 AQTSLYVALDPELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVS 319
            ||.|.|:|:..|||.|:|:||...:.|..:|.|.|.:.|:.||..|
  Rat   268 AQPSTYLAVAEELESVSGKYFDGLREKAPSPEAEDEEVARRLWTES 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_001260784.1 PRK06197 43..323 CDD:235737 150/278 (54%)
NADB_Rossmann 45..319 CDD:304358 149/274 (54%)
Rdh13NP_001101938.1 NADB_Rossmann 38..313 CDD:419666 149/274 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 247 1.000 Domainoid score I2082
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H121782
Inparanoid 1 1.050 312 1.000 Inparanoid score I2503
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm45462
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.780

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