DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and Rdh13

DIOPT Version :10

Sequence 1:NP_610306.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001101938.1 Gene:Rdh13 / 361504 RGDID:1304959 Length:334 Species:Rattus norvegicus


Alignment Length:306 Identity:158/306 - (51%)
Similarity:201/306 - (65%) Gaps:1/306 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LSFTGTTTGLAFFVKDLMQGGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVYMACRNL 79
            :|..||..|....:||.:.||....:....|:..|||||||||||:|..|:|||||.:.:|||:.
  Rat     8 VSVVGTVIGGTVLLKDYVAGGACPSKATIPGRTVIVTGANTGIGKQTALELAKRGGNIILACRDR 72

  Fly    80 KKCEEAREEIVLETKNKYVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSD 144
            :|||.|.::|..||.|..|.....||||.:|||.|.....:|:|.:.:|:|||.|||||...|.|
  Rat    73 EKCEAAAKDIRGETLNPRVRAEHLDLASLKSIREFAGKIIKEEERVDILVNNAAVMRCPHWTTED 137

  Fly   145 GIELQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLN-SDKSYDEGKAYSQ 208
            |.|:|.||||:|||||||||||.||.|:||||:|:|||||..|.|:..||| ..|.||...||.|
  Rat   138 GFEMQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQIKKYDTKAAYCQ 202

  Fly   209 SKLANVLFTRELAKRLEGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKPLFWPFVKTPRNG 273
            ||||.||||:||::||:||.||.|||||||..||:.||.|..|:.|:|..:.|.||...|:|:..
  Rat   203 SKLAVVLFTKELSRRLQGTGVTVNALHPGVARTELGRHTGMHNSAFSGFMLGPFFWLLFKSPQLA 267

  Fly   274 AQTSLYVALDPELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVS 319
            ||.|.|:|:..|||.|:|:||...:.|..:|.|.|.:.|:.||..|
  Rat   268 AQPSTYLAVAEELESVSGKYFDGLREKAPSPEAEDEEVARRLWTES 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_610306.1 Rossmann-fold NAD(P)(+)-binding proteins 45..319 CDD:473865 149/274 (54%)
Rdh13NP_001101938.1 Rossmann-fold NAD(P)(+)-binding proteins 38..313 CDD:473865 149/274 (54%)

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