DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30491 and DC2.5

DIOPT Version :9

Sequence 1:NP_001260784.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_503155.4 Gene:DC2.5 / 183970 WormBaseID:WBGene00017082 Length:337 Species:Caenorhabditis elegans


Alignment Length:348 Identity:103/348 - (29%)
Similarity:166/348 - (47%) Gaps:49/348 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFAFLKSRTAFWLSFTGTTTGLAFFVKDLMQGGQFTKETNE---------TGKVFIVTGANTGIG 58
            :|:.:.|....|...||.       |.|..:..:|...||.         :||.:.:||..:|:|
 Worm     1 MFSIIFSSNQIWSDITGK-------VDDGKRTRKFHSRTNALEVVRGIDLSGKTYAITGTTSGVG 58

  Fly    59 KETVREIAKRGGTVYMACRNLKKCEEAREEIVLETKNKYVYCRQCDLASQESIRHFVAAFKREQE 123
            .||.|....:|..:.|..||....|..::.::.||.:..:...||||:|..|::.....:..::.
 Worm    59 TETARAFILKGAHIVMINRNYAASETLKQSLLCETPDARIDIVQCDLSSLASVKKTAEEYLTKKW 123

  Fly   124 HLHVLINNAGVMRCPRSLTSDGIELQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGE 188
            .||.||.||||:......|:|..|...|:||:.||||...||.:|:.|:|||||.:||   |..:
 Worm   124 PLHGLILNAGVLGRKEKTTADRFEAHFGINHLAHFLLIKELLPVLRSSAPSRIVILSS---TLSK 185

  Fly   189 INTGDLNSDKSYDEG--------------KAYSQSKLANVLFTRELAKRLEGTNVTANALHPG-V 238
            ..:  :|.|...:|.              :.|::||:.|:|...:|.:......::..::||| .
 Worm   186 FTS--INPDSKIEEKLGTLCPKNATEWYYRLYAKSKMCNMLIAFKLHRDEFENGISVYSVHPGSA 248

  Fly   239 VDTEIIRHMGFFN--NFFAGLFVKPLFWPFVKTPRNGAQTSLYVALDPELEKVTGQYFSDC---K 298
            |.|.:.|.:.|::  ||        |..||.|....||.||||.|:.||:::::|:|:..|   :
 Worm   249 VRTNLHRDVPFWSIFNF--------LSIPFTKNASQGAATSLYCAVHPEVQELSGRYWESCWDDE 305

  Fly   299 LKEMAPAATDTQTAKWLWAVSEK 321
            |......|.|.:..:.||..||:
 Worm   306 LNLDEKVARDEELQEALWEYSEE 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_001260784.1 PRK06197 43..323 CDD:235737 93/308 (30%)
NADB_Rossmann 45..319 CDD:304358 91/293 (31%)
DC2.5NP_503155.4 PRK06196 28..331 CDD:235736 96/314 (31%)
retinol-DH_like_SDR_c_like 45..323 CDD:212492 89/290 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4278
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.690

Return to query results.
Submit another query.