DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and RDH13

DIOPT Version :9

Sequence 1:NP_001260784.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001139443.1 Gene:RDH13 / 112724 HGNCID:19978 Length:331 Species:Homo sapiens


Alignment Length:314 Identity:164/314 - (52%)
Similarity:208/314 - (66%) Gaps:1/314 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SRTAFWLSFTGTTTGLAFFVKDLMQGGQFTKETNETGKVFIVTGANTGIGKETVREIAKRGGTVY 73
            ||....||..||..|.|..:||.:.||....:....||..|||||||||||:|..|:|:|||.:.
Human     2 SRYLLPLSALGTVAGAAVLLKDYVTGGACPSKATIPGKTVIVTGANTGIGKQTALELARRGGNII 66

  Fly    74 MACRNLKKCEEAREEIVLETKNKYVYCRQCDLASQESIRHFVAAFKREQEHLHVLINNAGVMRCP 138
            :|||:::|||.|.::|..||.|.:|..|..||||.:|||.|.|....|:|.:.:|||||||||||
Human    67 LACRDMEKCEAAAKDIRGETLNHHVNARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCP 131

  Fly   139 RSLTSDGIELQLGVNHMGHFLLTNLLLDLLKKSSPSRIVNVSSLAHTRGEINTGDLN-SDKSYDE 202
            ...|.||.|:|.||||:|||||||||||.||.|:||||:|:|||||..|.|:..||| ..:.|:.
Human   132 HWTTEDGFEMQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQTRKYNT 196

  Fly   203 GKAYSQSKLANVLFTRELAKRLEGTNVTANALHPGVVDTEIIRHMGFFNNFFAGLFVKPLFWPFV 267
            ..||.|||||.||||:||::||:|:.||.|||||||..||:.||.|...:.|:...:.|:||..|
Human   197 KAAYCQSKLAIVLFTKELSRRLQGSGVTVNALHPGVARTELGRHTGIHGSTFSSTTLGPIFWLLV 261

  Fly   268 KTPRNGAQTSLYVALDPELEKVTGQYFSDCKLKEMAPAATDTQTAKWLWAVSEK 321
            |:|...||.|.|:|:..||..|:|:||...|.|..||.|.|.:.|:.|||.|.:
Human   262 KSPELAAQPSTYLAVAEELADVSGKYFDGLKQKAPAPEAEDEEVARRLWAESAR 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_001260784.1 PRK06197 43..323 CDD:235737 152/280 (54%)
NADB_Rossmann 45..319 CDD:304358 151/274 (55%)
RDH13NP_001139443.1 retinol-DH_like_SDR_c 38..313 CDD:212495 151/274 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 251 1.000 Domainoid score I2108
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H121782
Inparanoid 1 1.050 316 1.000 Inparanoid score I2553
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm41333
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1312.810

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