DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30491 and rdh11

DIOPT Version :9

Sequence 1:NP_001260784.1 Gene:CG30491 / 35704 FlyBaseID:FBgn0050491 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_031751072.1 Gene:rdh11 / 100485470 XenbaseID:XB-GENE-5943090 Length:327 Species:Xenopus tropicalis


Alignment Length:280 Identity:112/280 - (40%)
Similarity:160/280 - (57%) Gaps:7/280 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GKVFIVTGANTGIGKETVREIAKRGGTVYMACRNLKKCEEAREEIVLETKNKYVYCRQCDLASQE 109
            ||..|||||||||||....::|:|...|.:|||:.::.:.|.|||..:|.|..|.....|.:|..
 Frog    42 GKTAIVTGANTGIGKCVAMDLARRNARVILACRSRERGQRALEEIRRQTGNGAVLLEMLDTSSMA 106

  Fly   110 SIRHFVAAFKREQEHLHVLINNAGVMRCPRSLTSDGIELQLGVNHMGHFLLTNLLLDLLKKSSPS 174
            |:|.|.....::::.|.:||||||....|.|:|::|:|.....||:|.|||||||..|::||:||
 Frog   107 SVRAFADRILQQEKRLDILINNAGASGLPHSMTAEGLENTFATNHLGPFLLTNLLTGLMRKSAPS 171

  Fly   175 RIVNVSSLAHTRGEINTGDLNSD--KSYDEGKAYSQSKLANVLFTRELAKRLEGTNVTANALHPG 237
            |||.|||..|..|||:...|...  :.:.....|:.|||.|::...|.|:||.||.||..:|.||
 Frog   172 RIVFVSSFNHKNGEIHLSCLRGQNIRGFRPDYPYNCSKLMNIMCANEFARRLRGTGVTVTSLDPG 236

  Fly   238 VVDTEIIRHMGFFNNFFAGLFVKPLFWPFVKTPRNGAQTSLYVALDPELEKVTGQYFS-DCKLKE 301
            :|.||.:|    :.:.|..|..|.:.:.|.:||..||.::::.|:..|.|.:|.:|.. ||.|..
 Frog   237 IVMTEAVR----YYSIFIRLIFKSIGFFFFRTPEEGAVSTIFCAVSEEAEGLTEKYIDCDCMLAL 297

  Fly   302 MAPAATDTQTAKWLWAVSEK 321
            .:|||.|......||...|:
 Frog   298 PSPAARDPPVTAKLWEACEQ 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30491NP_001260784.1 PRK06197 43..323 CDD:235737 112/280 (40%)
NADB_Rossmann 45..319 CDD:304358 111/276 (40%)
rdh11XP_031751072.1 NADB_Rossmann 42..313 CDD:419666 110/274 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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