DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17985 and AT1G55000

DIOPT Version :10

Sequence 1:NP_610305.1 Gene:CG17985 / 35702 FlyBaseID:FBgn0033199 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_564673.1 Gene:AT1G55000 / 841942 AraportID:AT1G55000 Length:221 Species:Arabidopsis thaliana


Alignment Length:204 Identity:41/204 - (20%)
Similarity:84/204 - (41%) Gaps:47/204 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PDDVEDIFARPA----YDDDEFEDLLPLARRPNGHARLGRYENTLEVKVQEGDTLQALALRFHSS 77
            |..::::..|||    :.|:                  |.::..:..::..||::.:||:::...
plant    48 PWRIKELVGRPASVSFWRDN------------------GIWKFAISHRICRGDSVTSLAVKYAVQ 94

  Fly    78 VADIKRLNKIDRENEIHAHRVIRIPVTVHNVL--------LGNGGLEALPAVHRSGNNSPRHNIE 134
            |.||||||.:..::.|::...:.||::...:|        |.......:..::..|  :|:   .
plant    95 VMDIKRLNNMMSDHGIYSRDRLLIPISNPEILANTTCYVELDKYAKREVAVLYLEG--APK---R 154

  Fly   135 REPAPERNPLEDARQMLD-ERLLVAAVNASGAVDHEKPSTSRAAGQFYEGAQGAPN---DEANME 195
            .:|.|..|  :.:....| :|.|:.::..|..||      ...|..:...|:|.|.   .|.:.:
plant   155 EQPVPGTN--QQSNLSADGKRRLIESLRRSMQVD------DGTALYYLAIAEGDPRSALSEFSAD 211

  Fly   196 QPYEENAAL 204
            ..:|..|.|
plant   212 LRWERQAGL 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17985NP_610305.1 LysM 59..102 CDD:396179 12/42 (29%)
AT1G55000NP_564673.1 F-box-like 9..40 CDD:463757
LysM <73..121 CDD:440998 14/47 (30%)
Blue background indicates that the domain is not in the aligned region.

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