DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17985 and AT5G23130

DIOPT Version :9

Sequence 1:NP_610305.1 Gene:CG17985 / 35702 FlyBaseID:FBgn0033199 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_197704.2 Gene:AT5G23130 / 832377 AraportID:AT5G23130 Length:397 Species:Arabidopsis thaliana


Alignment Length:209 Identity:48/209 - (22%)
Similarity:81/209 - (38%) Gaps:41/209 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PLARRPNGHARLGRYENTLEVKVQEGDTLQALALRFHSSVADIKRLNKIDRENEIHAHRVIRIPV 103
            |.:..|:..:....|   :|.:|.:.|||..:|:::...||||.:||.:..:.::.|...:|||:
plant    55 PTSSPPSSASTCAGY---IEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIPL 116

  Fly   104 TVH---NVLLGNGGL-------EALPAVHRSGNNSPRHNIEREPAPERNPLEDARQML----DER 154
            ...   :..|.||.|       |...:...:||:              ..:.|:.|.|    .|:
plant   117 PGRHPPSPCLSNGSLNHGEDWSEQASSSASNGNH--------------QDVFDSFQSLRLNHSEK 167

  Fly   155 LLVAAVNASGAVDHEKPSTSRAAGQF----YEGAQGAPNDEANMEQPYEENAALLNH------MV 209
            .:..|:|:.......||...||:..|    |:.......|......|:...:..|:|      :|
plant   168 KISPAMNSLQGYYGLKPKNRRASEGFGMAVYKNEASQLQDNDQYLTPFPATSTPLSHHRKSRSLV 232

  Fly   210 DRHAPLVRPIPGPS 223
            |.....|...|.||
plant   233 DAVIAEVNQSPNPS 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17985NP_610305.1 LysM 59..102 CDD:279777 13/42 (31%)
LysM <60..105 CDD:224306 15/44 (34%)
AT5G23130NP_197704.2 LysM 70..114 CDD:212030 13/43 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR20932
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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