DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and glpK

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_418361.1 Gene:glpK / 948423 ECOCYCID:EG10398 Length:502 Species:Escherichia coli


Alignment Length:212 Identity:49/212 - (23%)
Similarity:76/212 - (35%) Gaps:58/212 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 GIEPPKGVLLFGPPGTGKTLCAR-AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA-RSK 267
            ||...:...|||      .||.: .:|..|                .|.|..|:....|.| :|:
E. coli   242 GIAGDQQAALFG------QLCVKEGMAKNT----------------YGTGCFMLMNTGEKAVKSE 284

  Fly   268 KACLIFF-----DEID-AIGGARFDDGAGGDNEVQ--RTMLELINQLDGFDPRGNIKVLMATNRP 324
            ...|...     .|:: |:.||.|..||    .:|  |..::|||  |.:|..     ..||...
E. coli   285 NGLLTTIACGPTGEVNYALEGAVFMAGA----SIQWLRDEMKLIN--DAYDSE-----YFATKVQ 338

  Fly   325 DT----LDPALMRPGR-----LDRKVEFGLPDQDGRSHIFKIHARSMSVE-RDIRFDLLARLCPN 379
            :|    :.||....|.     ..|...|||......:||.:....|::.: ||:...:.|     
E. coli   339 NTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQA----- 398

  Fly   380 STGAEIRSVCTEAGMFA 396
            .:|..:.::..:.|..|
E. coli   399 DSGIRLHALRVDGGAVA 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 49/212 (23%)
glpKNP_418361.1 glpK 1..498 CDD:234594 49/212 (23%)

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