DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and YME1

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_015349.1 Gene:YME1 / 856135 SGDID:S000006228 Length:747 Species:Saccharomyces cerevisiae


Alignment Length:483 Identity:141/483 - (29%)
Similarity:216/483 - (44%) Gaps:100/483 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKS----------------IEEDIQK--------A 55
            :::.:|::.|.| ......|...||.|.:.:.|                ..|.:|:        |
Yeast   108 EQEANKDLTSPD-AQAAFYKLLLQSNYPQYVVSRFETPGIASSPECMELYMEALQRIGRHSEADA 171

  Fly    56 VKQVNELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYII------- 113
            |:| |.||.   |..|...|:|...::::.......|...:.    :.....:|.:::       
Yeast   172 VRQ-NLLTA---SSAGAVNPSLASSSSNQSGYHGNFPSMYSP----LYGSRKEPLHVVVSESTFT 228

  Fly   114 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMM---QVED------K 169
            .|.::.|::  |...:......||.       ||         |....|::   :|.|      |
Yeast   229 VVSRWVKWL--LVFGILTYSFSEGF-------KY---------ITENTTLLKSSEVADKSVDVAK 275

  Fly   170 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTD 234
            .:|.:.||.||.|...:|.|:|:. |..|.|:.:||.:.||||||.|||||||||.|||.|....
Yeast   276 TNVKFDDVCGCDEARAELEEIVDF-LKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAG 339

  Fly   235 ACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM 299
            ..|..:.|||..:.|||.||:.:|:||..|||:...:||.||:|||||.|   ........::|:
Yeast   340 VDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKR---NPKDQAYAKQTL 401

  Fly   300 LELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSV 364
            .:|:.:||||.....|.::.|||.|:.||.||.||||.|:.|...|||..||:.|.|.|.:.:::
Yeast   402 NQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMKKITL 466

  Fly   365 ERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIR---------------------ARRKVATEKD 408
            ..::...::||..|..:|||:.::..:|.::|.:                     |.||.....|
Yeast   467 ADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTD 531

  Fly   409 -------FLEAVKKVIKSYAKFSATPRY 429
                   |.||...::..|.. .|||.|
Yeast   532 AARKATAFHEAGHAIMAKYTN-GATPLY 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 121/386 (31%)
YME1NP_015349.1 HflB <269..709 CDD:440233 108/295 (37%)

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