DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and MPA43

DIOPT Version :9

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_014150.1 Gene:MPA43 / 855472 SGDID:S000005193 Length:542 Species:Saccharomyces cerevisiae


Alignment Length:125 Identity:22/125 - (17%)
Similarity:46/125 - (36%) Gaps:38/125 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 VGGCKEQIEKLREVVETPLLHPEKFVNLG---IEPPKGVLLFGPPGT-------------GKTLC 225
            :.|.:.:.|:|..::        ..||.|   |:|.:.|.:.|..|.             ...:.
Yeast   428 ISGSQAKNERLLSLI--------SLVNNGVAIIKPKENVDMMGIKGAYVLAKSAKEKKQLADVIT 484

  Fly   226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVREL--------FEMARSKKACLIFFDEI 277
            .|.::|.::..      ..|.:..:|..:.::|:|        .:||:.:|......||:
Yeast   485 ERDISNDSEKF------ESLAEYRLGNDSILLRKLLCVKYHIHLDMAKQQKRYHKLVDEV 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 RPT1 27..430 CDD:224143 22/125 (18%)
MPA43NP_014150.1 AraB 4..542 CDD:223995 22/125 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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