DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and AT1G53780

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001185217.1 Gene:AT1G53780 / 841815 AraportID:AT1G53780 Length:620 Species:Arabidopsis thaliana


Alignment Length:460 Identity:302/460 - (65%)
Similarity:359/460 - (78%) Gaps:31/460 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DYLGDDQRKVKHDEKEDKE-------IKSLDEGDI----------ELLKT-------------YG 37
            |.:.|.:.:..|:.:.|.|       ::..:.|||          |.|..             :.
plant   160 DIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFE 224

  Fly    38 QSQYHKSIKSIEEDIQKAVKQVNELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKII 102
            |..|...||.:|::|.:..:::..| ||||||||||||..|||.:|||::|.||||.||.||:||
plant   225 QEPYSARIKKVEKEINELAEKICNL-GIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQII 288

  Fly   103 NADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVE 167
            :.:::|.||::::|:..|:||.|.|..:|||||.|||||||:.||||.|||||||||:||||.||
plant   289 SPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVE 353

  Fly   168 DKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 232
            :|||.||||:|||||||||:|||||.|:|||||||.|||:||||||.:||||:||||.|||||||
plant   354 EKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANR 418

  Fly   233 TDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQR 297
            |.||||||:||||||||:|||||||||||:||||||||::||||||||||||||||.|.||||||
plant   419 TGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQR 483

  Fly   298 TMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSM 362
            ||||::.||||||.||||||||||||||.|||||:|||||||||||.|||.:||:.|||||.|:|
plant   484 TMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTM 548

  Fly   363 SVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATP 427
            |.||||||:|||.||||||||:|||||.||||:||.||||..||||||:||.||:|.|.||||||
plant   549 SCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATP 613

  Fly   428 RYMTY 432
            :||.|
plant   614 KYMAY 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 264/341 (77%)
AT1G53780NP_001185217.1 cyclophilin <4..95 CDD:469651
PRK03992 278..616 CDD:179699 261/337 (77%)
Blue background indicates that the domain is not in the aligned region.

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