DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and AT1G45000

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_175120.1 Gene:AT1G45000 / 841065 AraportID:AT1G45000 Length:399 Species:Arabidopsis thaliana


Alignment Length:425 Identity:174/425 - (40%)
Similarity:256/425 - (60%) Gaps:37/425 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GDDQRKVKHDEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKESDT 70
            |||..:.:.....|...|.|...::|           ..:::..|:::.|.|:.|:    .|.| 
plant     4 GDDAARRRTAAVTDYRKKLLHHKELE-----------SRVRTARENLRAAKKEFNK----TEDD- 52

  Fly    71 GLAPPALWDLAADKQIL-QNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDI 134
                  |..|.:..||: :..:||             |:.:.|:......::||.....|....:
plant    53 ------LKSLQSVGQIIGEVLRPL-------------DNERLIVKASSGPRYVVGCRSKVDKEKL 98

  Fly   135 EEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
            ..|.||.:|.....|...||.::||.|..|..||..:::||.|||..:||.:|||.:|.||::||
plant    99 TSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPE 163

  Fly   200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
            .|:.:||:|||||||:|||||||||.|||:|:..||.|::|:.|.::.||:||.||::||:|..|
plant   164 LFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYA 228

  Fly   265 RSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 329
            |..:.|:||.||||||||.||.:|...|.|:|||::||:|||||||..|.:|::|||||||.|||
plant   229 REHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDP 293

  Fly   330 ALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGM 394
            ||:||||||||:|..||::..|..|.||||..::...:|.::.:.:|.....||::|::||||||
plant   294 ALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGM 358

  Fly   395 FAIRARRKVATEKDFLEAVKKVIKSYAKFSATPRY 429
            |||||.|.....:||::||:|:.:: .|..::..|
plant   359 FAIRAERDYVIHEDFMKAVRKLSEA-KKLESSSHY 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 157/342 (46%)
AT1G45000NP_175120.1 PRK03992 24..397 CDD:179699 168/405 (41%)

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