DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and RPT5B

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_172384.1 Gene:RPT5B / 837431 AraportID:AT1G09100 Length:423 Species:Arabidopsis thaliana


Alignment Length:409 Identity:171/409 - (41%)
Similarity:244/409 - (59%) Gaps:38/409 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EDIQKAVKQV-NELTGIKESD--TGLAPPALWDLAADKQILQNEQ---------PLQVARCTKII 102
            :||.:|.:.: ||:..:||..  |.|      ||.:.|:.::..|         |..|....:|:
plant    22 DDIGRASRLLANEIRILKEESQRTNL------DLESVKEKIKENQEKIKLNKQLPYLVGNIVEIL 80

  Fly   103 ------NADSDDPKYIINVKQFAKFVV-----------DLADSVAPTDIEEGMRVGVDRNKYQIH 150
                  :|:.|.....::.::..|.||           .:...|.|..::.|..|||:::.|.|.
plant    81 EMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLIL 145

  Fly   151 IPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLF 215
            ..||.:.|..|..|:|::||...|:|:||.::||::|.|.:..|:.|.|:|..|||.|||||||:
plant   146 DTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLY 210

  Fly   216 GPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAI 280
            |||||||||.|||.|.:|:|.|:::.|.:|||.::|:||::||:.|.:|:.|..|:||.||||||
plant   211 GPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAI 275

  Fly   281 GGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 345
            |..|||....||.|||||||||:||||||.....|||:.||||.|.|||||||.||||||:||..
plant   276 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPH 340

  Fly   346 PDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFL 410
            |.::.|..|.:||:|.|:|..|:.|:.|||...:..||::::||.||||.|:|........:||.
plant   341 PTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405

  Fly   411 EAVKKVIKSYAKFSATPRY 429
            |.   :|:..||..|:..|
plant   406 EG---IIQVQAKKKASLNY 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 159/368 (43%)
RPT5BNP_172384.1 PRK03992 31..416 CDD:179699 166/393 (42%)

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