DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and ftsh10

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_172231.2 Gene:ftsh10 / 837265 AraportID:AT1G07510 Length:813 Species:Arabidopsis thaliana


Alignment Length:453 Identity:135/453 - (29%)
Similarity:210/453 - (46%) Gaps:73/453 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DQRKVKHDEKEDKEIKS-----LDEGDIELLKTY---------------------------GQSQ 40
            :|:::...|.::|.:::     :|..:.|:.|.|                           ||.:
plant   159 EQQQISFQEFKNKLLEAGLVDHIDVSNKEVAKVYVRSSPKSQTTEEVVQGPGNGVPAKGRGGQYK 223

  Fly    41 YHKSIKSIEEDIQKAVKQVNELTGIKESD---TGLAPPALWDLAADKQILQNEQPLQVARCTKII 102
            |:.:|.|: |..::.:::..|..|:...|   .......:|     .|.|....|..:...|.|.
plant   224 YYFNIGSV-ESFEEKLEEAQEAIGVNSHDFVPVTYVSETIW-----YQELLRFAPTLLLVATLIF 282

  Fly   103 NADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVE 167
            .|              .:....|.....|     |.:.|  |..:.|.       ...:|.....
plant   283 GA--------------RRMQGGLGGLGGP-----GGKAG--RGIFNIG-------KAQITRADKN 319

  Fly   168 DKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 232
            .|..:.:.||.||:|..:::.|.|.. |.:|:|:.:||.:.|||.||.|||||||||.|:|.|..
plant   320 SKNKIYFKDVAGCEEAKQEIMEFVHF-LQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGE 383

  Fly   233 TDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDG-AGGDNEVQ 296
            :...|:.:.||:.::.:||.|...||.||:.||.....:||.|||||||.||...| :||::|.:
plant   384 SAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERE 448

  Fly   297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARS 361
            .|:.:|:.::|||.....:.||..|||||.||.||:||||.||::....||..||..||:|:.:.
plant   449 STLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKK 513

  Fly   362 MSVERDIRF--DLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYAK 422
            :.::.:..:  ..||.|.|...||:|.:||.||.:.|.|......|...|..|:.:||....|
plant   514 IKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEK 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 116/338 (34%)
ftsh10NP_172231.2 HflB 143..763 CDD:440233 135/453 (30%)

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