DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and EMB3144

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_201263.2 Gene:EMB3144 / 836579 AraportID:AT5G64580 Length:855 Species:Arabidopsis thaliana


Alignment Length:437 Identity:137/437 - (31%)
Similarity:213/437 - (48%) Gaps:72/437 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IKSLDEGDIELLK--TYGQS-----QYHKSIKSI--EEDIQKAV--------------------K 57
            :|.||...::.::  .|||:     .|:|..:.:  |||.:|.:                    |
plant   154 MKLLDSNSVQYMEYSNYGQTISVILPYYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKK 218

  Fly    58 QVNELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFV 122
            ...::..::..:..:.|..::...|...:......|.|:....|   ||      |....:||.:
plant   219 LHQQIVNVEVFNVDVVPAEVYTTVATFVVWSMRLALFVSLYVWI---DS------ITRPIYAKLI 274

  Fly   123 VDLADSVAPT-DIEEGMR------VGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGC 180
            .  .|...|| .|.:.::      :|..|.|:                :..|:|..||:.|..| 
plant   275 P--CDLGTPTKKIRQPLKRQALGSLGKSRAKF----------------ISAEEKTGVTFDDFAG- 320

  Fly   181 KEQIEK-LREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
            :|.|:: |:|:|.. |.:.|:|.|.||..||||||.|||||||||.|:|:|......|....|::
plant   321 QEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTD 384

  Fly   245 LVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGAR-FDDGAGGDNEVQRTMLELINQLDG 308
            .|:.:||..|..|::||..:||....:||.|||||||..| ..|..||..|.::.:|:::.::||
plant   385 FVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDG 449

  Fly   309 FD-PRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSV-ERDIRFD 371
            |. ....:.|:.||||.|.|||||:|.||.|:.:..|||.:|||..|.|:|||:... ..|.:.:
plant   450 FKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRLAILKVHARNKFFRSEDEKEE 514

  Fly   372 LLARLCPNS---TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKK 415
            ||..:..|:   ||||:::|..|||:...|........::.|||:|:
plant   515 LLQEVAENTEDFTGAELQNVLNEAGILTARKDLDYIGREELLEALKR 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 122/342 (36%)
EMB3144NP_201263.2 HflB 147..748 CDD:440233 137/437 (31%)

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