DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and FTSH11

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_568787.1 Gene:FTSH11 / 835398 AraportID:AT5G53170 Length:806 Species:Arabidopsis thaliana


Alignment Length:262 Identity:101/262 - (38%)
Similarity:149/262 - (56%) Gaps:12/262 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 PPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPP 218
            |.:::..:|    .:|...|:.||.||.:..::|.||||. |.:|.||..||.:.|||:||.|.|
plant   345 PKELNKEIT----PEKNVKTFKDVKGCDDAKQELEEVVEY-LKNPSKFTRLGGKLPKGILLTGAP 404

  Fly   219 GTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGA 283
            ||||||.|:|:|......|....|||..:.:||.|||.||.||:.|:.|..|:||.|||||:|..
plant   405 GTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 469

  Fly   284 RFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQ 348
            |    ...:...::|:.:|:.::|||:....|.|:.|||.||.|||||.||||.||.:....||.
plant   470 R----KQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDV 530

  Fly   349 DGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGM-FAIRARRKVATEKDFLEA 412
            .||..|.:::.:...:..|:....:||..|...||::.::...|.: .|:....|:::|:  ||.
plant   531 RGREEILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQ--LEF 593

  Fly   413 VK 414
            .|
plant   594 AK 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 101/262 (39%)
FTSH11NP_568787.1 HflB <350..784 CDD:440233 100/257 (39%)

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