DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and KATNAL2

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001340828.1 Gene:KATNAL2 / 83473 HGNCID:25387 Length:564 Species:Homo sapiens


Alignment Length:271 Identity:81/271 - (29%)
Similarity:144/271 - (53%) Gaps:32/271 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTD 234
            |::.::|:.|.....:.::|.|..|:.:|:.|..: :.|.||:||:|||||||||.|:|||....
Human   275 PNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGI-LSPWKGLLLYGPPGTGKTLLAKAVATECK 338

  Fly   235 ACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQ-RT 298
            ..|..:..|.:|.|:.|:..::||.|||:||......||.||::::...| ...:||::|.. |.
Human   339 TTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQR-GTASGGEHEGSLRM 402

  Fly   299 MLELINQLDGFDPRGN-IKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIH---- 358
            ..||:.|:||.....: :.||.|:|.|..||.|::|  ||::::...||.::.|..:. .|    
Human   403 KTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSREARQAMI-YHWLPP 464

  Fly   359 ---ARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAI------------------RARRK 402
               :|::.:..::.:.:|::.....:|::|:.||.||.|..:                  |.:..
Human   465 VSKSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFDALENHQSESSDLPRIQLD 529

  Fly   403 VATEKDFLEAV 413
            :.|..|||:.:
Human   530 IVTTADFLDVL 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 81/271 (30%)
KATNAL2NP_001340828.1 LisH 51..81 CDD:128913
RPT1 212..548 CDD:440835 81/271 (30%)
RecA-like_VPS4-like 282..446 CDD:410917 61/167 (37%)
Blue background indicates that the domain is not in the aligned region.

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