DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and RPT4A

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_199115.1 Gene:RPT4A / 834316 AraportID:AT5G43010 Length:399 Species:Arabidopsis thaliana


Alignment Length:407 Identity:171/407 - (42%)
Similarity:251/407 - (61%) Gaps:36/407 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KTYGQSQYHKS----------IKSIEEDIQKAVKQVNELTGIKESDTGLAPPALWDLAADKQIL- 87
            :|...|:|.|.          :::..|:::.|.|:.|:    .|.|       |..|.:..||: 
plant    11 RTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNK----TEDD-------LKSLQSVGQIIG 64

  Fly    88 QNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIP 152
            :..:||             |:.:.|:......::||.....|....:..|.||.:|.....|...
plant    65 EVLRPL-------------DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRA 116

  Fly   153 LPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGP 217
            ||.::||.|..|..||..:::||.|||..:||.:|||.:|.||::||.|:.:||:|||||||:||
plant   117 LPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP 181

  Fly   218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGG 282
            |||||||.|||:|:..||.|::|:.|.::.||:||.||::||:|..||..:.|:||.||||||||
plant   182 PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGG 246

  Fly   283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPD 347
            .||.:|...|.|:|||::||:|||||||..|.:|::|||||||.|||||:||||||||:|..||:
plant   247 RRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN 311

  Fly   348 QDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEA 412
            :..|..|.||||..::...:|.::.:.:|.....||::|::|||||||||||.|.....:||::|
plant   312 EQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKA 376

  Fly   413 VKKVIKSYAKFSATPRY 429
            |:|:.:: .|..::..|
plant   377 VRKLSEA-KKLESSSHY 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 157/342 (46%)
RPT4ANP_199115.1 PRK03992 24..397 CDD:179699 167/394 (42%)

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