DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rpt1 and RPT2b

DIOPT Version :9

Sequence 1:	NP_477473.1	Gene:	Rpt1 / 35701	FlyBaseID:	FBgn0028687	Length:	433	Species:	Drosophila melanogaster
Sequence 2:	NP_179604.1	Gene:	RPT2b / 816533	AraportID:	AT2G20140	Length:	443	Species:	Arabidopsis thaliana

Alignment Length:	449	Identity:	170/449 - (37%)
Similarity:	255/449 - (56%)	Gaps:	58/449 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 PDYLGDDQRKVKHDEKEDK--EIKSLDEGDIELLKTYGQSQY----------HKSIKSIEEDIQK 54
            |..:|..|||.|..|...:  .:....:..:.|||......|          .:.:|..||..::
plant    33 PARVGRKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEE 97

  Fly    55 AVKQVNELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIIN------ADSDDPKYII 113
            ...:|::|.|                          .|:.|....::|:      :.|..|:|.:
plant    98 DRSKVDDLRG--------------------------TPMSVGNLEELIDENHAIVSSSVGPEYYV 136

  Fly   114 NVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVG 178
            .:..|          |....:|.|..:.:......:...|..::||.|::|:||..|..:|:|:|
plant   137 GILSF----------VDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIG 191

  Fly   179 GCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGS 243
            |.:.||::::|.||.||.|||.:.::||:|||||:|:|.|||||||.|:||||.|.|.|:||:||
plant   192 GLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGS 256

  Fly   244 ELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308
            ||:|||:|:|.::|||||.:|......::|.|||||:|..|:|..:||:.|:|||||||:|||||
plant   257 ELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDG 321

  Fly   309 FDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLL 373
            ||.||::||::||||.::|||||:||||:|||:||.|||...|..||:||...|::..|:..:..
plant   322 FDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEF 386

  Fly   374 ARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATPR--YM 430
            .......:||:|:::|||||:.|:|.||...|..||.:|.:||:  :.|....|.  ||
plant   387 VMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVM--FKKKEGVPEGLYM 443

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	161/420 (38%)
RPT2b	NP_179604.1	PTZ00361	7..443	CDD:185575	168/447 (38%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D571919at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820