DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt1 and FGGY

DIOPT Version :9

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001106882.1 Gene:FGGY / 55277 HGNCID:25610 Length:575 Species:Homo sapiens


Alignment Length:103 Identity:23/103 - (22%)
Similarity:36/103 - (34%) Gaps:38/103 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HDEKEDKEI--------KSLDEG-DIELLKTYG----------QSQYHKSIKSIEEDI------- 52
            |.|:..::|        |.:.:| |:..::..|          ..|:|....:.|.|.       
Human    50 HHEQSSEDIWAACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMW 114

  Fly    53 --QKAVKQVNELTGIKESDT----GL------APPALW 78
              .:||.|||.:...|.|..    |:      ||..||
Human   115 LDHRAVSQVNRINETKHSVLQYVGGVMSVEMQAPKLLW 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 RPT1 27..430 CDD:224143 19/82 (23%)
FGGYNP_001106882.1 FGGY_YpCarbK_like 10..568 CDD:212663 23/103 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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