Protein Alignment Rpt1 and psmc5

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_001003740.1
• Gene: psmc5 / 445285
• ZFINID: ZDB-GENE-030131-6547
• Length: 406
• Species: Danio rerio
• Alignment Length: 408
• Identity: 196/408 - (48%)
• Similarity: 263/408 - (64%)
• Gaps: 29/408 - (7%)

  Fly    22 IKSLDEGDIELLK-TYGQSQYHKSIKSIEE----------DIQKAVKQVNELTGIKESDTGLAPP 75
            :..:::.|||..| ..|..||:  :..|||          ::::...|.|||.         |..
Zfish     3 LDGIEQMDIEDSKGGSGLRQYY--LSKIEELQLTVNEKSQNLRRLQAQRNELN---------AKV 56

  Fly    76 ALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRV 140
            .|  |..:.|:|| ||...|....:.:    |..|.::.|....|||||:..::...|:....||
Zfish    57 RL--LREELQLLQ-EQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRV 114

  Fly   141 GVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLG 205
            .:..:.|.:|..||.|:||.|::|.||..||.||..:||..:||::::||:|.|:.|||.|..||
Zfish   115 ALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG 179

  Fly   206 IEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKAC 270
            |..||||||:|||||||||.|||||:.||..||||.|||||||::|||||||||||.|||.....
Zfish   180 IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPS 244

  Fly   271 LIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPG 335
            :||.||||:||.:|.:.|:|||:|||||||||:||||||:...||||:|||||.|.||.||:|||
Zfish   245 IIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPG 309

  Fly   336 RLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRAR 400
            |:|||:||..|:::.|..|.|||:|.|::.|.|....:|.|.|.::|||::.|||||||:|:|.|
Zfish   310 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER 374

  Fly   401 RKVATEKDFLEAVKKVIK 418
            |...|::||..||.||::
Zfish   375 RVHVTQEDFEMAVAKVMQ 392

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	196/403 (49%)
psmc5	NP_001003740.1	RPT1	4..404	CDD:224143	196/407 (48%)
		AAA_16	153..>206	CDD:289934	34/52 (65%)
		AAA	186..318	CDD:278434	94/131 (72%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820