Protein Alignment Rpt1 and Rpt5

DIOPT Version :10

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_524464.1
• Gene: Rpt5 / 42805
• FlyBaseID: FBgn0028684
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 440
• Identity: 179/440 - (40%)
• Similarity: 255/440 - (57%)
• Gaps: 46/440 - (10%)

  Fly     5 LGDDQRKVKHDE------KEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQ------KAVK 57
            ||::..::..||      ..|.|||.:....|.:  |:.....::.||...|.|:      ..|.
  Fly    18 LGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRI--THEIQAQNEKIKDNTEKIKVNKTLPYLVS 80

  Fly    58 QVNELTGI---KESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFA 119
            .|.||..:   :|.|.|           ...:|.|::.   .:|..|  ..|....|.:.|..
  Fly    81 NVIELLDVDPQEEEDDG-----------SVTVLDNQRK---GKCAVI--KTSTRQAYFLPVIG-- 127

  Fly   120 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQI 184
              :|| |:.:.|.|:     |||:::.|.|...||.:.|..|..|:|:::|...|||:||..:||
  Fly   128 --LVD-AEKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQI 184

  Fly   185 EKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKY 249
            ::|.|.|..|:.|.|||.||||.|||||||:|||||||||.|||.|.:|.:.|:::.|.:|||.:
  Fly   185 QELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMF 249

  Fly   250 VGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGN 314
            :|:||::||:.|.:|:.|...:||.||:||||..|||....||.|||||||||:||||||....:
  Fly   250 IGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTAD 314

  Fly   315 IKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPN 379
            |||:.||||.|.|||||:|.||||||:||..|:::.|:.|.:||:|.|:|..|:.|:.|:|...:
  Fly   315 IKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDD 379

  Fly   380 STGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATPRY 429
            ..||:.::||.||||.|:|......|.:||::|:.:|   .||..|...|
  Fly   380 FNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEV---QAKKKANLNY 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	PRK03992	88..430	CDD:179699	157/342 (46%)
Rpt5	NP_524464.1	PRK03992	28..421	CDD:179699	175/423 (41%)