Protein Alignment Rpt1 and Rpt3R

DIOPT Version :10

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_649938.2
• Gene: Rpt3R / 41190
• FlyBaseID: FBgn0037742
• Length: 405
• Species: Drosophila melanogaster
• Alignment Length: 422
• Identity: 167/422 - (39%)
• Similarity: 236/422 - (55%)
• Gaps: 78/422 - (18%)

  Fly     3 DYLGDDQRKVK----HDEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELT 63
            ||:.::||.:|    |.::|.|.||:     :.|:                  |.:.::.|:|..
  Fly    46 DYIKEEQRNLKKEFIHAQEEVKRIKA-----VPLV------------------IGQFLEAVDENN 87

  Fly    64 GIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADS 128
            ||..|.||                .|    ...|....|:.:...|...:.:.:.:..:|||
  Fly    88 GIVASTTG----------------SN----YYVRVLSTIDREQLKPSSSVGLHKQSNCLVDL--- 129

  Fly   129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVET 193
                                    :||:.|.|::|:..::|||::|||:||...|.:::||.||.
  Fly   130 ------------------------VPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVEL 170

  Fly   194 PLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVR 258
            ||.|.:.:..:||:||:|||||||||.|||:.|:|||:.|.|.||||:|||.||||:|||.||||
  Fly   171 PLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVR 235

  Fly   259 ELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNR 323
            :||.:|:.....:||.||||||...|||...|.|.||||.:|||:||:||||...||||:|||||
  Fly   236 DLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNR 300

  Fly   324 PDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRF-DLLARLCPNS-TGAEIR 386
            .|||||||:||||||||:|..|||:..:..:|......|:|..|:.. |::||  |:. :.|:|.
  Fly   301 ADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIAR--PDKISNADIN 363

  Fly   387 SVCTEAGMFAIRARRKVATEKDFLEAVKKVIK 418
            ::|.||||.|:|..|.|...|||.:..|..::
  Fly   364 AICQEAGMHAVRENRYVVNAKDFEKGYKTSVR 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	PRK03992	88..430	CDD:179699	148/333 (44%)
Rpt3R	NP_649938.2	PTZ00454	20..405	CDD:240423	167/422 (40%)