Protein Alignment Rpt1 and psmc6

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_989342.1
• Gene: psmc6 / 394968
• XenbaseID: XB-GENE-978099
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 415
• Identity: 178/415 - (42%)
• Similarity: 253/415 - (60%)
• Gaps: 46/415 - (11%)

  Fly     5 LGDDQRKVKHDEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKESD 69
            |.|.::|:...::.|..:|.|.|...||.|     ||.||    |.|: ||::.|.::.|
 Frog     9 LQDYRKKLLEHKEIDGRLKELREQLKELTK-----QYEKS----ENDL-KALQSVGQIVG----- 58

  Fly    70 TGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDI 134
                       ...||:.:.          |.|...::.|:|::..::          .:..|.:
 Frog    59 -----------EVLKQLTEE----------KFIVKATNGPRYVVGCRR----------QLDKTKL 92

  Fly   135 EEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 199
            :.|.||.:|.....|...||.::||.|..|..||..:|:||::||..|||.:||||:|.||.:||
 Frog    93 KPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPE 157

  Fly   200 KFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 264
            .|..:||.||||.||:|||||||||.|||||::.|..|::|:.|.:|.||:||.||::||:|..|
 Frog   158 LFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYA 222

  Fly   265 RSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDP 329
            |..:.|:||.||||||||.||.:|...|.|:|||::||:||:||||....:|::|||||||||||
 Frog   223 RDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287

  Fly   330 ALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGM 394
            ||:||||||||:...||::..|..|.||||..::...:|.::.:.:|.....||::|:|||||||
 Frog   288 ALLRPGRLDRKIHIELPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 352

  Fly   395 FAIRARRKVATEKDFLEAVKKVIKS 419
            |||||.|....::||::||:||..|
 Frog   353 FAIRADRDFVVQEDFMKAVRKVADS 377

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	172/393 (44%)
psmc6	NP_989342.1	RPT1	4..387	CDD:224143	178/415 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920