Protein Alignment Rpt1 and Rpt4R

DIOPT Version :10

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_648525.1
• Gene: Rpt4R / 39351
• FlyBaseID: FBgn0036224
• Length: 398
• Species: Drosophila melanogaster
• Alignment Length: 421
• Identity: 171/421 - (40%)
• Similarity: 256/421 - (60%)
• Gaps: 59/421 - (14%)

  Fly     7 DDQR----------KVKHDEKEDKEIKSL-DEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVN 60
            ||:|          .::|.|.|.| :|:| |:..:.      .::|.||     ||..||::.|.
  Fly    11 DDERVRALTNYRTKLLEHREIESK-LKALRDKYKVV------NAEYEKS-----EDDLKALQSVG 63

  Fly    61 ELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDL 125
            ::.|                    :||:...|      ...|...|:.|:|::..::
  Fly    64 QMVG--------------------EILKQLTP------DNFIVKASNGPRYVVGCRR-------- 94

  Fly   126 ADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREV 190
              .:....::.|.||.:|.....|...||.::||.|..|..||..:|.|:::||..:||.:||||
  Fly    95 --QINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREV 157

  Fly   191 VETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGAR 255
            :|.|||:|:.|:.:||.||||.||:|||||||||.|||:|::.||.|::|:.|.:|.||:||.||
  Fly   158 IELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESAR 222

  Fly   256 MVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA 320
            ::||:|..||..:.|:||.||||||||.||.:|...|.|:|||::||:||:||||..|.:|::||
  Fly   223 LIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMA 287

  Fly   321 TNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEI 385
            |||||||||||:||||||||:|..||::..|..|.||||..::...:|.::.:.:|.....||::
  Fly   288 TNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADL 352

  Fly   386 RSVCTEAGMFAIRARRKVATEKDFLEAVKKV 416
            |::|||||:||:|..|:...::||::||:|:
  Fly   353 RNICTEAGLFALRCDREFVIQEDFMKAVRKI 383

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	PRK03992	88..430	CDD:179699	150/329 (46%)
Rpt4R	NP_648525.1	PRK03992	13..388	CDD:179699	169/419 (40%)