DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and CG11594

DIOPT Version :9

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001261391.1 Gene:CG11594 / 38473 FlyBaseID:FBgn0035484 Length:548 Species:Drosophila melanogaster


Alignment Length:425 Identity:77/425 - (18%)
Similarity:139/425 - (32%) Gaps:155/425 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EGDIELLKTYG--QSQYHKSIKSIEEDIQKAVKQVNELTGIKESDT-GLAPPALWDLAADKQILQ 88
            |..::.::|:.  ...|::|..:|.:.|.:.||:|  :.|:.:|.. |:.    :|         
  Fly    30 EQAVQTIQTWNPEPGYYNQSSDNIWQSICQVVKKV--IGGVDKSKVKGIG----FD--------- 79

  Fly    89 NEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEE------------GMRVG 141
                   |.|:.::......|..:....:..:.::...|..|..:.:|            |.:|.
  Fly    80 -------ATCSLVVLGPQGSPLTVSKSGEAEQNIILWMDHRAEQETQEINAFKHSLLKYVGGQVS 137

  Fly   142 VDRNKYQIHIP----LPPKIDPTV-TMMQVEDKPD-VTYSDVG---------GCK---------- 181
            :     ::.:|    |...:..|. .:.:|.|.|| :|:...|         .||          
  Fly   138 L-----EMEVPKLLWLKRNLSQTFGNIWRVFDLPDFLTWRATGVDTRSLCSVVCKWNYDAANGSW 197

  Fly   182 -EQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPG--TGKTLCARAVANRTDACFIRVIGS 243
             ::..|..::.|   |....|..||.:       ..|||  .||.|.|:| |.........|:.:
  Fly   198 NKEFLKQADLEE---LTQNNFEKLGSD-------VQPPGRTVGKGLTAKA-AGELGLSAGTVVST 251

  Fly   244 ELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIG--GARFDDGAGGDNEVQRTMLELINQL 306
            .|:..:.|                           |:|  |.|..:..|.|              
  Fly   252 SLIDAHAG---------------------------ALGMFGCRSKESKGAD-------------- 275

  Fly   307 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQD-----------GRS-------H 353
               |.:|.:.::..|:   |...::.|.....:.| :| |.||           |:|       |
  Fly   276 ---DVQGKMALIAGTS---TCHMSITRKACFAQGV-WG-PYQDAIIPGYFLNEGGQSIAGHLLDH 332

  Fly   354 IFKIH-----ARSMSVERDIRFDLLARLCPNSTGA 383
            :.|.|     .:|...|....:..|.:|.|....|
  Fly   333 VLKSHESYAELKSQLGEDKFIYQHLNKLLPELAAA 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 RPT1 27..430 CDD:224143 77/425 (18%)
CG11594NP_001261391.1 FGGY_YpCarbK_like 5..540 CDD:212663 77/425 (18%)
5C_CHO_kinase 6..540 CDD:273552 77/425 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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