Protein Alignment Rpt1 and Rpt4

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_572308.3
• Gene: Rpt4 / 31567
• FlyBaseID: FBgn0028685
• Length: 397
• Species: Drosophila melanogaster
• Alignment Length: 422
• Identity: 183/422 - (43%)
• Similarity: 260/422 - (61%)
• Gaps: 53/422 - (12%)

  Fly     1 MPDYLG----DDQRK--VKHDEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQV 59
            |||.|.    .:.||  ::|.|.|.: :|...|...:|.|.|.:|         |.|: ||::.|
  Fly     8 MPDNLRVKALSEYRKKLLEHKEIEGR-LKEKREEIKDLTKLYDKS---------ENDL-KALQSV 61

  Fly    60 NELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVD 124
            .::.|          ..|..|..||.|::                .::.|:|::..::
  Fly    62 GQIVG----------EVLKQLTEDKFIVK----------------ATNGPRYVVGCRR------- 93

  Fly   125 LADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLRE 189
               .:....::.|.||.:|.....|...||.::||.|..|..||..|||||.:||..:||.:|||
  Fly    94 ---QLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELRE 155

  Fly   190 VVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
            |:|.|||:||.|:.:||.||||.||:|||||||||.|||||::.||.|::|:.|.:|.||:||.|
  Fly   156 VIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESA 220

  Fly   255 RMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLM 319
            |::||:|..||..:.|:||.||||||||.||.:|...|.|:|||::||:||:||||..|.:|::|
  Fly   221 RLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIM 285

  Fly   320 ATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAE 384
            ||||||||||||:||||||||:|..||::..|..|.||||..::...:|.::.:.:|..|..||:
  Fly   286 ATNRPDTLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGAD 350

  Fly   385 IRSVCTEAGMFAIRARRKVATEKDFLEAVKKV 416
            :|:||||||:|||||.|:...::||::||:||
  Fly   351 LRNVCTEAGLFAIRAEREYVIQEDFMKAVRKV 382

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	173/390 (44%)
Rpt4	NP_572308.3	RPT1	13..395	CDD:224143	179/417 (43%)
		AAA	179..311	CDD:278434	84/131 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45445433
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.950