DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rpt1 and Fggy

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001013954.2 Gene:Fggy / 298250 RGDID:1359429 Length:552 Species:Rattus norvegicus


Alignment Length:131 Identity:31/131 - (23%)
Similarity:46/131 - (35%) Gaps:42/131 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 RTMLELINQLD-------GFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHI 354
            |...|::..:|       |||...::.||.....|..::    |.|...|.:...| |....|.:
  Rat    65 RVTKEIVQGIDAHRIRGLGFDATCSLVVLDKEFHPLPVN----REGDSSRNIIMWL-DHRAVSQV 124

  Fly   355 FKIHARS----------MSVE-------------RDI-------RFDLLARLCPNSTGAEIRSVC 389
            .:|:...          ||||             |:|       .|||...|...:||...||:|
  Rat   125 HRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKATGVTARSLC 189

  Fly   390 T 390
            :
  Rat   190 S 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 31/131 (24%)
FggyNP_001013954.2 ASKHA_NBD_FGGY_D-RBK 12..545 CDD:466800 31/131 (24%)

Return to query results.
Submit another query.