Protein Alignment Rpt1 and Psmc2

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_150239.2
• Gene: Psmc2 / 25581
• RGDID: 3428
• Length: 433
• Species: Rattus norvegicus
• Alignment Length: 433
• Identity: 397/433 - (91%)
• Similarity: 418/433 - (96%)
• Gaps: 0/433 - (0%)

  Fly     1 MPDYLGDDQRKVKHDEKEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGI 65
            ||||||.||||.|.|||:||.|::||||||.||||||||.|.:.||.:|:|||:.:|::||||||
  Rat     1 MPDYLGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGI 65

  Fly    66 KESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVA 130
            ||||||||||||||||||||.||:|||||||||||||||||:||||||||||||||||||:|.||
  Rat    66 KESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVA 130

  Fly   131 PTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPL 195
            |||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||||
  Rat   131 PTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPL 195

  Fly   196 LHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260
            ||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 LHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVREL 260

  Fly   261 FEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325
            |||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 FEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPD 325

  Fly   326 TLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCT 390
            |||||||||||||||:||.|||.:||:||||||||||||||||||:|||||||||||||||||||
  Rat   326 TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCT 390

  Fly   391 EAGMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATPRYMTYN 433
            ||||||||||||:||||||||||.|||||||||||||||||||
  Rat   391 EAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	373/402 (93%)
Psmc2	NP_150239.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..22		16/20 (80%)
		RPT1	23..430	CDD:224143	375/406 (92%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166338785
Domainoid	1	1.000	382	1.000	Domainoid score	I794
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2096
Inparanoid	1	1.050	805	1.000	Inparanoid score	I465
OMA	1	1.010	-	-		QHG54011
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	1	1.000	-	-		FOG0004356
OrthoInspector	1	1.000	-	-		oto98908
orthoMCL	1	0.900	-	-		OOG6_101899
Panther	1	1.100	-	-	LDO	PTHR23073
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X3079
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	16	15.770