Protein Alignment Rpt1 and Katna1

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_035965.2
• Gene: Katna1 / 23924
• MGIID: 1344353
• Length: 493
• Species: Mus musculus
• Alignment Length: 469
• Identity: 136/469 - (28%)
• Similarity: 204/469 - (43%)
• Gaps: 93/469 - (19%)

  Fly    28 GDIELLKTYGQ------SQYHKSIK---------SIEEDIQKAVKQVNELTGIKES--------- 68
            |:.:....|.|      ::|..|:|         .:.::|....|||.::....||
Mouse    22 GNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQVWQEINVEAKQVKDIMKTLESFKLDITSLQ 86

  Fly    69 ----DTGLAPPALWDLAA-----------DKQILQNEQPLQVA-RCTKIINADSDDPKYIINVKQ 117
                :...|...:|.|..           .:|..|:..|...: |.:.::.|....|:.:.|
Mouse    87 AAQHEFPAAEGEVWSLPVPVERRPLPGPRKRQSSQHSDPKPHSNRPSTVVRAHRPSPQNLHN--- 148

  Fly   118 FAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPP--KIDPT------VTMMQ---VEDKPD 171
                  |...:|...:.:|..:...::||....:..|.  |.|.|      |..::   :...|:
Mouse   149 ------DRGKAVRSREKKEQSKGREEKNKLPAAVTEPEANKFDGTGYDKDLVEALERDIISQNPN 207

  Fly   172 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPP-KGVLLFGPPGTGKTLCARAVANRTDA 235
            |.:.|:....|..:.|:|.|..|:..||.|  .||..| ||||:.|||||||||.|:|||.....
Mouse   208 VRWYDIADLVEAKKLLQEAVVLPMWMPEFF--KGIRRPWKGVLMVGPPGTGKTLLAKAVATECKT 270

  Fly   236 CFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTM- 299
            .|..|..|.|..||.||..::||.||||||......||.||||:|...|   |...::|..|.|
Mouse   271 TFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRR---GTSEEHEASRRMK 332

  Fly   300 LELINQLDGF-------DPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKI 357
            .||:.|:||.       ||...:.||.|||.|..:|.||.|  ||::::...||...||..:.:|
Mouse   333 AELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRI 395

  Fly   358 HARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRAR---------RKVATE------- 406
            ..|.:.:..|:....:|......:||:|.:||.:|.:.|:|.|         |.::.|
Mouse   396 SLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTT 460

  Fly   407 -KDFLEAVKKVIKS 419
             :||..|:||:.||
Mouse   461 MEDFEMALKKISKS 474

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	136/469 (29%)
Katna1	NP_035965.2	AAA	243..384	CDD:214640	65/145 (45%)
		AAA	247..383	CDD:278434	62/140 (44%)
		Vps4_C	<458..491	CDD:286426	7/17 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900