DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and Gk5

DIOPT Version :9

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001355808.1 Gene:Gk5 / 235533 MGIID:2443336 Length:534 Species:Mus musculus


Alignment Length:110 Identity:26/110 - (23%)
Similarity:43/110 - (39%) Gaps:29/110 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 VGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVL---------------------LFGPPG- 219
            :.|.:|:.|:.||.:......|.:|| ||::....|:                     ::..|| 
Mouse     1 MSGQQERAERQREELSASASPPSRFV-LGLDVGSTVIRCHVYDQTARVRGSSAQKVENVYPQPGW 64

  Fly   220 ---TGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261
               ...:|.|:.||...||  ::..|.::.| .||.|....|..|
Mouse    65 VEIDPDSLWAQFVAVIKDA--VKAAGVQMNQ-IVGLGISTQRATF 106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 RPT1 27..430 CDD:224143 26/110 (24%)
Gk5NP_001355808.1 FGGY_GK5_metazoa 25..527 CDD:212665 20/86 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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