Protein Alignment Rpt1 and rpt-1

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_506005.1
• Gene: rpt-1 / 179641
• WormBaseID: WBGene00004501
• Length: 435
• Species: Caenorhabditis elegans
• Alignment Length: 435
• Identity: 368/435 - (84%)
• Similarity: 405/435 - (93%)
• Gaps: 2/435 - (0%)

  Fly     1 MPDYLGDDQRKVKHDE--KEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELT 63
            |||:||||.||.|.|:  :|:|..::||||||.:||.|||..|.:.:|:::.||:..:|:||||:
 Worm     1 MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELS 65

  Fly    64 GIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADS 128
            |:||||||||||||||:|||||.:|.|||||||||||||.:|..||:|:||||||||||||||||
 Worm    66 GVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADS 130

  Fly   129 VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVET 193
            ||||||||||||||||||||||:|||.||||||||||||:|||||||||||||:|||||||||||
 Worm   131 VAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVET 195

  Fly   194 PLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVR 258
            ||||||::|||||||||||||:|||||||||||||||||||||||||||||||||||||||||||
 Worm   196 PLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVR 260

  Fly   259 ELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNR 323
            |||||||:|||||||||||||:||||||||.||||||||||||||||||||||||||||||||||
 Worm   261 ELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNR 325

  Fly   324 PDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSV 388
            ||||||||||||||||||||.|||..||:||.||||:.||||||||:||||||||||||||||||
 Worm   326 PDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSV 390

  Fly   389 CTEAGMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATPRYMTYN 433
            ||||||||||||||||||||||||:.||:|.||||||||||:|:|
 Worm   391 CTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPRYLTHN 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	350/402 (87%)
rpt-1	NP_506005.1	RPT1	29..432	CDD:224143	350/402 (87%)
		AAA	214..345	CDD:278434	126/130 (97%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158478
Domainoid	1	1.000	346	1.000	Domainoid score	I554
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2096
Inparanoid	1	1.050	757	1.000	Inparanoid score	I283
Isobase	1	0.950	-	0	Normalized mean entropy	S70
OMA	1	1.010	-	-		QHG54011
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	1	1.000	-	-		FOG0004356
OrthoInspector	1	1.000	-	-		oto20149
orthoMCL	1	0.900	-	-		OOG6_101899
Panther	1	1.100	-	-	LDO	PTHR23073
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1001
SonicParanoid	1	1.000	-	-		X3079
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	16	15.790