Protein Alignment Rpt1 and rpt-2

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_504558.1
• Gene: rpt-2 / 178988
• WormBaseID: WBGene00004502
• Length: 443
• Species: Caenorhabditis elegans
• Alignment Length: 451
• Identity: 171/451 - (37%)
• Similarity: 258/451 - (57%)
• Gaps: 61/451 - (13%)

  Fly     6 GDDQRKVKHDE-------KEDKEIKSLDEGD------------IELLKTYGQSQY---------- 41
            |:.:.|.|::.       |:.|..|..|...            ::|||:.....|
 Worm    20 GEKKEKKKYEAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQN 84

  Fly    42 HKSIKSIEEDIQKAVKQVNELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADS 106
            .:.:|..||..::...:|:||.|                          .|:.|....:||
 Worm    85 QERLKPQEERQEEERAKVDELRG--------------------------TPMAVGSLEEII---- 119

  Fly   107 DDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPD 171
            ||...|::....::..|::...|....:|.|..|.::...:.:...|....||.|::|::|..|.
 Worm   120 DDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184

  Fly   172 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDAC 236
            .||:||||..:||::::|.||.||.|||.:..:||.|||||:|:|.|||||||.|:||||:|.|.
 Worm   185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSAT 249

  Fly   237 FIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301
            |:|::||||:|||:|:|.:||||||.:|......::|.|||||:|..|:|..:||:.|:||||||
 Worm   250 FLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLE 314

  Fly   302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVER 366
            |:|||||||.||::||||||||.::|||||:||||:|||:||.|||:..:..||:||...|::.:
 Worm   315 LLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGK 379

  Fly   367 DIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATP 427
            ::..:.........:||:|:::|||||:.|:|.||...|.:||.::.:.|:  |.|....|
 Worm   380 EVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVL--YRKKEGAP 438

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	164/423 (39%)
rpt-2	NP_504558.1	PTZ00361	1..443	CDD:185575	171/451 (38%)
		Prot_ATP_ID_OB	112..>179	CDD:293059	16/70 (23%)
		AAA	225..358	CDD:278434	85/132 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820