Protein Alignment Rpt1 and rpt-6

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_499609.1
• Gene: rpt-6 / 176661
• WormBaseID: WBGene00004506
• Length: 416
• Species: Caenorhabditis elegans
• Alignment Length: 402
• Identity: 193/402 - (48%)
• Similarity: 261/402 - (64%)
• Gaps: 25/402 - (6%)

  Fly    23 KSLDEGDIELLKTYGQSQY---HKSIKSIEEDIQKAVKQVNEL-TGIKESDTGLAPPALWDLAAD 83
            |..:|.|.:.|:.|..::.   .:.:....:::::...|.||| |.::..
 Worm    20 KLTEESDEKTLRKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRML--------------- 69

  Fly    84 KQILQ--NEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNK 146
            |:.||  :||...|...:|.:    |..|.::.|....|:|||:..|:....:..|.||.:..:.
 Worm    70 KEELQQLHEQGSYVGEVSKAM----DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADS 130

  Fly   147 YQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKG 211
            |.:|..||.|:||.|::|.||..||.||..|||..:||::::||:|.|:.|||.|..|||..|||
 Worm   131 YALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKG 195

  Fly   212 VLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDE 276
            |||||||||||||.|||||:.|:..||||.|||||||::|||||||||||.|||.....:||.||
 Worm   196 VLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDE 260

  Fly   277 IDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKV 341
            ||:||.:|.:..:|||:|||||||||:||||||:...||||:|||||.|.|||||:||||:|||:
 Worm   261 IDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKI 325

  Fly   342 EFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATE 406
            ||..||:..|:.|.|||:|.|::.|.|....:|...|.::|||::||||||||||:|.||...|:
 Worm   326 EFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQ 390

  Fly   407 KDFLEAVKKVIK 418
            :||..||.||::
 Worm   391 EDFEMAVGKVMQ 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	192/398 (48%)
rpt-6	NP_499609.1	RPT1	10..414	CDD:224143	193/402 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820