Protein Alignment Rpt1 and mei-1

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_001370150.1
• Gene: mei-1 / 172612
• WormBaseID: WBGene00003183
• Length: 475
• Species: Caenorhabditis elegans
• Alignment Length: 410
• Identity: 118/410 - (28%)
• Similarity: 189/410 - (46%)
• Gaps: 44/410 - (10%)

  Fly     6 GDDQRKVKHDEKEDK-EIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKESD 69
            ||..|::..|.|..| ...:.||.|       .::.:.:::::..:.:|:.|:..::|.......
 Worm    32 GDLLRQLMTDVKSCKISASNRDEHD-------ARNTFLRALEANLKLVQQNVRDEDDLHEAMTRQ 89

  Fly    70 TGLAPPALWDLAADKQILQNEQP-----LQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSV 129
            :|...|     .||..:.....|     .:.....|.:.|....|:.|  .|..:....:.|| |
 Worm    90 SGSPEP-----PADPDVWSKPSPPLPSSSKFGATKKGVGAAGPRPREI--SKSTSSMSTNPAD-V 146

  Fly   130 APTDIEEGMRV------GVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLR 188
            .|.:..:|:..      ..|.:.|..:|     :......|....:..::..|:.|..:..:.|.
 Worm   147 KPANPTQGILPQNSAGDSFDASAYDAYI-----VQAVRGTMATNTENTMSLDDIIGMHDVKQVLH 206

  Fly   189 EVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
            |.|..|||.||.|..|. .|.|.::|.|||||||||.|||:|:.:.:.|..|..::|..|:.|:.
 Worm   207 EAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDS 270

  Fly   254 ARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEV-QRTMLELINQLDG----FDPRG 313
            .::||.|||:||.....:||.||||.:||.|   |..|::|. :|...|.:.|:||    ||.|
 Worm   271 EKIVRLLFELARFYAPSIIFIDEIDTLGGQR---GNSGEHEASRRVKSEFLVQMDGSQNKFDSR- 331

  Fly   314 NIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCP 378
            .:.||.|||.|..||.||.|  |.::::...|||.|.|..:.:..........:|.:|.||....
 Worm   332 RVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTE 394

  Fly   379 NSTGAEIRSVCTEAGMFAIR 398
            ..:||::.|:|..|.:..:|
 Worm   395 GFSGADVVSLCRTAAINVLR 414

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	111/388 (29%)
mei-1	NP_001370150.1	RecA-like_VPS4-like	195..359	CDD:410917	71/170 (42%)
		AAA_lid_3	383..423	CDD:407720	10/32 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910