DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and Gk2

DIOPT Version :9

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_034424.1 Gene:Gk2 / 14626 MGIID:1329027 Length:554 Species:Mus musculus


Alignment Length:248 Identity:49/248 - (19%)
Similarity:80/248 - (32%) Gaps:107/248 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 TGKTLCARAVANRTDACFIRVIGSELVQKYVGEG------ARMVRELFEMARSKKAC------LI 272
            |.:.:|:..|              ||.|:|..||      ..:::.::|..  .|||      .|
Mouse    32 TAELVCSHQV--------------ELTQEYPKEGWVEQDPKEILKSVYECI--AKACEKLAEVNI 80

  Fly   273 FFDEIDAIGGAR-------FDDGAGG---------DNEVQRTMLELINQLDGFDPRGNIKVLMAT 321
            ....|.|||.:.       :|...|.         |...|.|:..|..::.|   ..|. |...|
Mouse    81 DISNIKAIGVSNQRETTVVWDKFTGDPLYNAVVWLDLRTQSTVETLTKKIPG---NSNF-VKSKT 141

  Fly   322 NRP--------------DTLDPALMRPGRLDRKVE-----FGLPDQ----------DG------- 350
            ..|              |.|.|       :.:.||     ||..|.          :|       
Mouse   142 GLPLSTYFSAVKLRWMLDNLRP-------IQKAVEEGRAMFGTIDSWLIWCMTGGVNGGIHCTDV 199

  Fly   351 ----RSHIFKIHARSMSVERDI--RFDLLARLCPNSTGAEIRSVCTEAGMFAI 397
                |:.:|.||  |:..::|:  .|::...:.||        ||:.:.::.:
Mouse   200 TNACRTMLFNIH--SLEWDKDLCDFFEIPMSILPN--------VCSSSEIYGL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 RPT1 27..430 CDD:224143 49/248 (20%)
Gk2NP_034424.1 glycerol_kin 11..513 CDD:273549 49/248 (20%)
FGGY_GK1-3_metazoa 11..513 CDD:212664 49/248 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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