DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and Rpt5

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_310465.3 Gene:Rpt5 / 1271616 VectorBaseID:AGAMI1_003806 Length:427 Species:Anopheles gambiae


Alignment Length:429 Identity:175/429 - (40%)
Similarity:250/429 - (58%) Gaps:47/429 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LGDDQRKVKHDE------KEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQ------KAVK 57
            ||::..::..||      ..|.|||.: :.::..:....|:|..| ||...|.|:      ..|.
Mosquito    17 LGEEVLRMSTDELVSRTRLMDNEIKIM-KSEVVRINHELQTQNEK-IKDNTEKIKVNKTLPYLVS 79

  Fly    58 QVNELTGI---KESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFA 119
            .|.||..:   :|.|.|..      :..|.|        :..:|..|  ..|....|.:.     
Mosquito    80 NVIELLDVDPQEEEDDGAV------VVLDSQ--------RKGKCAVI--KTSTRQTYFLP----- 123

  Fly   120 KFVVDLADS--VAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKE 182
              |:.|.||  :.|.|:     |||:::.|.|...||.:.|..|..|:|:::|...|||:||..:
Mosquito   124 --VIGLVDSDKLKPGDL-----VGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDK 181

  Fly   183 QIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQ 247
            ||::|.|.|..|:.|.:||.||||.|||||||:|||||||||.|||.|.:|.:.|:::.|.:|||
Mosquito   182 QIQELIEAVVLPMTHKDKFKNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQ 246

  Fly   248 KYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
            .::|:||::||:.|.:|:.|...:||.||:||||..|||....||.|||||||||:||||||...
Mosquito   247 MFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSST 311

  Fly   313 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLC 377
            .:|||:.||||.|.|||||:|.||||||:||..|:::.|:.|.:||:|.|:|..|:.|:.|||..
Mosquito   312 ADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSPDVNFEELARST 376

  Fly   378 PNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKV 416
            .:..||:.::||.||||.|:|........:||::|:.:|
Mosquito   377 DDFNGAQCKAVCVEAGMIALRRSAVSVIHEDFMDAIMEV 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 151/331 (46%)
Rpt5XP_310465.3 PRK03992 27..420 CDD:179699 173/419 (41%)

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