DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and LOC1271199

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_309949.4 Gene:LOC1271199 / 1271199 VectorBaseID:AGAMI1_014752 Length:431 Species:Anopheles gambiae


Alignment Length:445 Identity:167/445 - (37%)
Similarity:251/445 - (56%) Gaps:42/445 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QRKVKHDEKEDKEIKSLDEGDI-----ELL-KTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKE 67
            :.:::...:||...|:::|..:     ||: :|.|   .:..||.:::.:...|..:..|||...
Mosquito     3 ENQIESHLREDSIEKTVEETFLGWSTEELIRRTNG---LNNEIKVLKDLLVSPVMDLKTLTGKVN 64

  Fly    68 SDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINAD-------SDD-----------PKYIIN 114
            ::            |:...|....|..||...::::.|       .:|           ...||.
Mosquito    65 TN------------AEHIKLHKRLPHLVATVMEVLDMDPLEEEKEQEDAMLLQDSQRKCKSAIIK 117

  Fly   115 VKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGG 179
            ......|.:.:...|.|..::.|..||::::.|.|...|||::||.|..|:|.::|...|.|:||
Mosquito   118 TSTRQTFFLPIIGLVEPEALKPGDLVGLNKDAYLIMDKLPPELDPRVKAMEVIERPTEQYIDIGG 182

  Fly   180 CKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE 244
            ...||.:|.|.:..||.|..||..:||:||||||::|||||||||.|||.|.:|.|.||::.|.:
Mosquito   183 LDTQIAELMEAIVLPLTHKAKFERIGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFIKLAGPQ 247

  Fly   245 LVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGF 309
            |||.::|:||::||:.|.:|:.|...::|.||:||||..|||....||.|||||||||:||||||
Mosquito   248 LVQMFIGDGAKLVRDAFALAKEKAPTILFIDELDAIGTKRFDSTKAGDREVQRTMLELLNQLDGF 312

  Fly   310 DPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLA 374
            ....::||:.||||.|.||||::|.||||||:||..|:...|:.|.:||:|.|:|..::.::.||
Mosquito   313 SSSADVKVIGATNRVDILDPAMLRSGRLDRKIEFPHPNDVARARIMQIHSRRMNVSGEVNYEELA 377

  Fly   375 RLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATPRY 429
            |......||:.::||.||||.|:|........:||:||:.:|   .||..|...|
Mosquito   378 RSTDGFNGAQCKAVCVEAGMIALRRSAVEVAHEDFMEAILEV---QAKKKAALNY 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 151/360 (42%)
LOC1271199XP_309949.4 None

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