DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt1 and Rpt6

DIOPT Version :10

Sequence 1:NP_477473.1 Gene:Rpt1 / 35701 FlyBaseID:FBgn0028687 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_061499158.1 Gene:Rpt6 / 1269903 VectorBaseID:AGAMI1_011589 Length:412 Species:Anopheles gambiae


Alignment Length:400 Identity:191/400 - (47%)
Similarity:256/400 - (64%) Gaps:28/400 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DIELLKTYGQSQYHKSIKSIEE----------DIQKAVKQVNELTGIKESDTGLAPPALWDLAAD 83
            |::..:..|...|.  ::.|||          ::::...|.|||..           .:..|..:
Mosquito    17 DVDPPRGEGFRSYF--VQKIEELQLIVAEKNQNLRRLQAQRNELNA-----------KVRMLREE 68

  Fly    84 KQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQ 148
            .|:|| ||...|....|    ..|..|.::.|....|||||:..::...|:....||.:....|.
Mosquito    69 LQLLQ-EQGSYVGEVVK----PMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNESYT 128

  Fly   149 IHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVL 213
            :|..||.|:||.|::|.||..||.||..|||..:||::::||:|.|:.|||.|..|||..|||||
Mosquito   129 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 193

  Fly   214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEID 278
            |:|||||||||.|||||:.|:..||||.|||||||::|||:|||||||.|||.....:||.||||
Mosquito   194 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID 258

  Fly   279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEF 343
            :||.:|.:.|:|||:|||||||||:||||||:...||||:|||||.|.|||||:||||:|||:||
Mosquito   259 SIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEF 323

  Fly   344 GLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 408
            ..|:::.|..|.|||:|.|::.|.|....:|.|.|.::|||::.|||||||:|:|.||...|::|
Mosquito   324 PPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQED 388

  Fly   409 FLEAVKKVIK 418
            |..||.||::
Mosquito   389 FEMAVAKVMQ 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt1NP_477473.1 PRK03992 88..430 CDD:179699 178/330 (54%)
Rpt6XP_061499158.1 None

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