Protein Alignment Rpt1 and Psmc1

DIOPT Version :9

• Sequence 1: NP_477473.1
• Gene: Rpt1 / 35701
• FlyBaseID: FBgn0028687
• Length: 433
• Species: Drosophila melanogaster
• Sequence 2: NP_476464.1
• Gene: Psmc1 / 117263
• RGDID: 621097
• Length: 440
• Species: Rattus norvegicus
• Alignment Length: 446
• Identity: 178/446 - (39%)
• Similarity: 261/446 - (58%)
• Gaps: 58/446 - (13%)

  Fly     1 MPDYLGDDQRKVKHDEKEDK----------EIKSLDEGDIELLKTY---------GQSQYHKSIK 46
            :|..:|..::|.|..:...|          .:|.|   .:|.:|.|         .|.|    :|
  Rat    29 VPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLL---KLERIKDYLLMEEEFIRNQEQ----MK 86

  Fly    47 SIEEDIQKAVKQVNELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKY 111
            .:||..::...:|::|.|                          .|:.|....:||    ||...
  Rat    87 PLEEKQEEERSKVDDLRG--------------------------TPMSVGTLEEII----DDNHA 121

  Fly   112 IINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSD 176
            |::....::..|.:...|....:|.|..|.::...:.:...|....||.||:|:||..|..||:|
  Rat   122 IVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYAD 186

  Fly   177 VGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
            :||...||::::|.||.||.|||.:..:||:|||||:|:|||||||||.|:||||:|.|.|:||:
  Rat   187 IGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVV 251

  Fly   242 GSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQL 306
            ||||:|||:|:|.::|||||.:|......::|.|||||||..|:|..:||:.|:|||||||:|||
  Rat   252 GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQL 316

  Fly   307 DGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFD 371
            ||||.||::||:|||||.:||||||:||||:|||:||.|||:..:..||:||...|::..|:..|
  Rat   317 DGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 381

  Fly   372 LLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYAKFSATP 427
            .|.....:.:||:|:::|||||:.|:|.||...|.:||.::.:.|:  |.|...||
  Rat   382 DLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTP 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt1	NP_477473.1	RPT1	27..430	CDD:224143	171/410 (42%)
Psmc1	NP_476464.1	PTZ00361	1..440	CDD:185575	178/446 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..49		4/19 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	84..104		6/23 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820